Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
NKX6-1P78426 RNU6-27P-201ENST00000516146 107 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX6-1P78426 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX6-1P78426 AC016957.1-201ENST00000534895 309 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX6-1P78426 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX6-1P78426 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX6-1P78426 AC136619.2-201ENST00000563361 631 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX6-1P78426 AC034268.2-201ENST00000571784 482 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX6-1P78426 NRBF2P1-201ENST00000587407 859 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 CKS1BP3-201ENST00000600888 237 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC009597.2-201ENST00000604659 592 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AL022154.1-201ENST00000604698 785 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC004853.1-201ENST00000604902 698 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX6-1P78426 AC091925.2-201ENST00000625059 256 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 PISRT1-201ENST00000626175 531 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 MIR7641-1-201ENST00000627518 61 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC110994.2-201ENST00000635481 492 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC099654.13-201ENST00000639774 207 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NKX6-1P78426 SCARNA15-201ENST00000607520 4325 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 MTND5P26-201ENST00000426018 1752 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
NKX6-1P78426 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NKX6-1P78426 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AL731532.2-201ENST00000623542 1953 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
NKX6-1P78426 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX6-1P78426 AC000374.1-201ENST00000434698 1745 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NKX6-1P78426 RNY4P34-201ENST00000364779 95 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
NKX6-1P78426 SNORD51-201ENST00000384320 80 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 MIR600-201ENST00000385007 98 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 RPL7P25-201ENST00000404151 721 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 RNU2-8P-201ENST00000410727 190 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 MTCYBP24-201ENST00000420387 1106 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX6-1P78426 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.53□□□□□ -1.68
NKX6-1P78426 MTND1P4-201ENST00000435196 415 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 ARPC3P1-201ENST00000437218 533 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AL450263.2-201ENST00000439400 589 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AC112653.1-201ENST00000443851 386 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 MRPL48P1-201ENST00000445390 636 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX6-1P78426 GAPDHP17-201ENST00000449858 1001 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AL672167.3-201ENST00000465951 960 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC021382.1-201ENST00000483523 359 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 RPL23AP41-201ENST00000484754 458 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX6-1P78426 RPL23AP72-201ENST00000492447 435 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC105252.1-201ENST00000503089 286 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.53□□□□□ -1.68
NKX6-1P78426 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AF213884.2-201ENST00000510417 903 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 GTF2F2P1-201ENST00000511083 675 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AC100784.1-201ENST00000522790 310 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 OR5G4P-201ENST00000525251 760 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 OR4P1P-201ENST00000530808 1136 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX6-1P78426 EEF1B2P4-201ENST00000551398 348 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.53□□□□□ -1.68
NKX6-1P78426 MIR3913-1-201ENST00000577744 102 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX6-1P78426 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.53□□□□□ -1.68
NKX6-1P78426 LLPHP1-201ENST00000603571 367 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC233280.2-201ENST00000603917 1070 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AL162431.4-201ENST00000604674 411 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AL451044.1-201ENST00000604867 238 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 IMMP1LP1-201ENST00000605170 488 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC121334.2-201ENST00000605387 271 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC093799.2-201ENST00000610062 578 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC099669.2-201ENST00000616549 437 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 AC073534.2-201ENST00000620377 381 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX6-1P78426 AC095031.1-201ENST00000623685 672 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms