Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 VN1R105P-201ENST00000486595 910 ntBASIC3.42□□□□□ -1.86
LMO4P61968 HMGB1P21-201ENST00000502313 581 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AC112198.1-201ENST00000505369 1220 ntBASIC3.42□□□□□ -1.86
LMO4P61968 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.42□□□□□ -1.86
LMO4P61968 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.42□□□□□ -1.86
LMO4P61968 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.42□□□□□ -1.86
LMO4P61968 SAP18P1-201ENST00000512058 390 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AC008837.2-201ENST00000513076 418 ntBASIC3.42□□□□□ -1.86
LMO4P61968 RNU6-720P-201ENST00000516363 108 ntBASIC3.42□□□□□ -1.86
LMO4P61968 Y_RNA.695-201ENST00000516715 107 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.42□□□□□ -1.86
LMO4P61968 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.42□□□□□ -1.86
LMO4P61968 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.42□□□□□ -1.86
LMO4P61968 UBE2NP1-201ENST00000545592 458 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.42□□□□□ -1.86
LMO4P61968 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.42□□□□□ -1.86
LMO4P61968 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.42□□□□□ -1.86
LMO4P61968 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.42□□□□□ -1.86
LMO4P61968 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.42□□□□□ -1.86
LMO4P61968 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.42□□□□□ -1.86
LMO4P61968 AC011260.1-201ENST00000578420 472 ntBASIC3.42□□□□□ -1.86
LMO4P61968 RN7SL703P-201ENST00000578485 302 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.42□□□□□ -1.86
LMO4P61968 SLC25A36P1-201ENST00000590111 465 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AP001542.2-201ENST00000593141 364 ntBASIC3.42□□□□□ -1.86
LMO4P61968 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.42□□□□□ -1.86
LMO4P61968 AC073544.2-201ENST00000601155 540 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AC006539.2-201ENST00000601729 572 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AC073648.5-201ENST00000603502 305 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.42□□□□□ -1.86
LMO4P61968 SNORD91B-202ENST00000608459 222 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AP000238.1-201ENST00000608759 426 ntBASIC3.42□□□□□ -1.86
LMO4P61968 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LMO4P61968 AL355073.2-201ENST00000612106 557 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AC116165.2-201ENST00000616705 206 ntBASIC3.42□□□□□ -1.86
LMO4P61968 MFSD8-245ENST00000641743 948 ntBASIC3.42□□□□□ -1.86
LMO4P61968 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LMO4P61968 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LMO4P61968 MTND5P24-201ENST00000438892 1767 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AP005901.5-201ENST00000545779 1796 ntBASIC3.42□□□□□ -1.86
LMO4P61968 AL139811.1-201ENST00000424779 2299 ntBASIC3.42□□□□□ -1.86
LMO4P61968 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LMO4P61968 AL122126.1-201ENST00000546905 1318 ntBASIC3.42□□□□□ -1.86
LMO4P61968 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LMO4P61968 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
LMO4P61968 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 AC021242.1-201ENST00000507315 2035 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.41□□□□□ -1.86
LMO4P61968 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
LMO4P61968 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.41□□□□□ -1.86
LMO4P61968 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LMO4P61968 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 RNU6-560P-201ENST00000364007 108 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RNU6-707P-201ENST00000364647 95 ntBASIC3.41□□□□□ -1.86
LMO4P61968 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 RNU6-1200P-201ENST00000384162 107 ntBASIC3.41□□□□□ -1.86
LMO4P61968 SNORA26.8-201ENST00000391306 124 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RN7SKP202-201ENST00000410439 330 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RNU6-77P-201ENST00000410554 91 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 RPL7P2-201ENST00000427639 268 ntBASIC3.41□□□□□ -1.86
LMO4P61968 MTND1P4-201ENST00000435196 415 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RPS24P1-201ENST00000438550 371 ntBASIC3.41□□□□□ -1.86
LMO4P61968 BMI1P1-201ENST00000445879 941 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AC005002.1-201ENST00000447458 540 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RPL23AP15-201ENST00000450202 459 ntBASIC3.41□□□□□ -1.86
LMO4P61968 SNORA84-201ENST00000459229 133 ntBASIC3.41□□□□□ -1.86
LMO4P61968 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 SETP11-201ENST00000473027 690 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AC091959.2-201ENST00000477363 321 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RN7SL132P-201ENST00000478131 296 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AC015724.1-201ENST00000478577 156 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RN7SL817P-201ENST00000480777 288 ntBASIC3.41□□□□□ -1.86
LMO4P61968 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.41□□□□□ -1.86
LMO4P61968 RPL21P129-201ENST00000491732 478 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RPS6P4-201ENST00000494693 758 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 NPM1P41-201ENST00000512920 831 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.41□□□□□ -1.86
LMO4P61968 HIGD1AP10-201ENST00000527837 282 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AC124293.1-201ENST00000530034 493 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 AC063950.1-201ENST00000552036 308 ntBASIC3.41□□□□□ -1.86
LMO4P61968 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO4P61968 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.41□□□□□ -1.86
LMO4P61968 AC074050.1-201ENST00000563247 211 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AC006362.1-201ENST00000567392 174 ntBASIC3.41□□□□□ -1.86
LMO4P61968 MIR3912-201ENST00000577566 105 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO4P61968 MIR3611-201ENST00000584484 83 ntBASIC3.41□□□□□ -1.86
LMO4P61968 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 AC067852.4-201ENST00000590314 478 ntBASIC3.41□□□□□ -1.86
LMO4P61968 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.41□□□□□ -1.86
LMO4P61968 AL606490.9-201ENST00000603331 271 ntBASIC3.41□□□□□ -1.86
LMO4P61968 RBM11P1-201ENST00000604951 799 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AC239868.4-201ENST00000608318 671 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms