Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RPL21P39-201ENST00000463605 483 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 AC011979.1-201ENST00000472300 483 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 RPL21P93-201ENST00000480465 489 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 AC233702.1-201ENST00000482905 502 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 AC087190.1-201ENST00000484462 480 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 AC007686.1-201ENST00000488511 463 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 AC093591.1-201ENST00000491435 481 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 RPL21P129-201ENST00000491732 478 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 RPL21P16-201ENST00000495531 483 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3S2P59780 AC004062.1-201ENST00000509926 645 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 FCF1P8-201ENST00000510322 597 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3S2P59780 OSBPL9P3-201ENST00000534523 595 ntBASIC2.79□□□□□ -1.96
AP3S2P59780 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.79□□□□□ -1.96
AP3S2P59780 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.79□□□□□ -1.96
AP3S2P59780 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
AP3S2P59780 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP3S2P59780 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
AP3S2P59780 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
AP3S2P59780 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP3S2P59780 MTND5P28-201ENST00000438005 1594 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.78□□□□□ -1.96
AP3S2P59780 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
AP3S2P59780 SNORD9-201ENST00000362566 104 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 RPL31P1-201ENST00000398116 372 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.78□□□□□ -1.96
AP3S2P59780 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.78□□□□□ -1.96
AP3S2P59780 UBE2V1P6-201ENST00000430840 422 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.78□□□□□ -1.96
AP3S2P59780 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.78□□□□□ -1.96
AP3S2P59780 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.78□□□□□ -1.96
AP3S2P59780 PCNAP1-201ENST00000505363 709 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 HSPD1P15-201ENST00000505573 1122 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.78□□□□□ -1.96
AP3S2P59780 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.78□□□□□ -1.96
AP3S2P59780 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.78□□□□□ -1.96
AP3S2P59780 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.78□□□□□ -1.96
AP3S2P59780 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
AP3S2P59780 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.78□□□□□ -1.96
AP3S2P59780 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.78□□□□□ -1.96
AP3S2P59780 AADACP1-206ENST00000561502 1193 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 COX6CP3-201ENST00000580869 223 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 BNIP3P7-201ENST00000605641 516 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
AP3S2P59780 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
AP3S2P59780 AL354798.1-201ENST00000622505 329 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.78□□□□□ -1.96
AP3S2P59780 AC084035.1-201ENST00000634543 607 ntBASIC2.78□□□□□ -1.96
AP3S2P59780 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
AP3S2P59780 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
AP3S2P59780 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
AP3S2P59780 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP3S2P59780 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.77□□□□□ -1.97
AP3S2P59780 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP3S2P59780 AL645937.1-201ENST00000641739 1652 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP3S2P59780 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP3S2P59780 RNU6-799P-201ENST00000363567 107 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
AP3S2P59780 RNA5SP274-201ENST00000410484 108 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.77□□□□□ -1.97
AP3S2P59780 RAD23BP2-201ENST00000416003 1207 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.77□□□□□ -1.97
AP3S2P59780 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.77□□□□□ -1.97
AP3S2P59780 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.77□□□□□ -1.97
AP3S2P59780 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.77□□□□□ -1.97
AP3S2P59780 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.77□□□□□ -1.97
AP3S2P59780 RPL7P29-201ENST00000437151 728 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC2.77□□□□□ -1.97
AP3S2P59780 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.77□□□□□ -1.97
AP3S2P59780 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
AP3S2P59780 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.77□□□□□ -1.97
AP3S2P59780 TPT1P3-201ENST00000492841 512 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 NDUFA5P12-201ENST00000503796 343 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 AC008565.1-201ENST00000509046 885 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 AC022616.2-201ENST00000523185 300 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.77□□□□□ -1.97
AP3S2P59780 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.77□□□□□ -1.97
AP3S2P59780 SERPINE4P-201ENST00000554978 281 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.77□□□□□ -1.97
AP3S2P59780 AC091057.2-201ENST00000602594 792 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.77□□□□□ -1.97
AP3S2P59780 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.77□□□□□ -1.97
AP3S2P59780 Z83843.1-201ENST00000604070 3685 ntBASIC2.77□□□□□ -1.97
AP3S2P59780 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP3S2P59780 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
AP3S2P59780 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP3S2P59780 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP3S2P59780 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
AP3S2P59780 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP3S2P59780 RNA5SP197-201ENST00000363357 119 ntBASIC2.76□□□□□ -1.97
AP3S2P59780 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
AP3S2P59780 RPL32P23-201ENST00000397237 405 ntBASIC2.76□□□□□ -1.97
AP3S2P59780 RNA5SP38-201ENST00000410750 119 ntBASIC2.76□□□□□ -1.97
AP3S2P59780 RNA5SP492-201ENST00000411330 114 ntBASIC2.76□□□□□ -1.97
AP3S2P59780 ATP5A1P2-201ENST00000412323 255 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms