Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 UBTFL3-201ENST00000418934 1024 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC006960.1-201ENST00000419980 153 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 XKRYP1-201ENST00000423438 492 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.98□□□□□ -1.61
RHBDL3P58872 XKRYP2-201ENST00000432915 492 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDL3P58872 MTND3P1-201ENST00000441336 220 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 ARPC3P5-201ENST00000448802 534 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 TRGVB-201ENST00000453257 471 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 MTCO3P11-201ENST00000455103 774 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 UBTFL6-201ENST00000477929 1024 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDL3P58872 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDL3P58872 XKRY-201ENST00000510392 1100 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 RN7SKP46-201ENST00000515942 234 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC090281.1-201ENST00000523019 276 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDL3P58872 AL139174.1-201ENST00000531489 886 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDL3P58872 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDL3P58872 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.98□□□□□ -1.61
RHBDL3P58872 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDL3P58872 LARP7P2-201ENST00000575306 125 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 BNIP3P38-201ENST00000601117 544 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AL592221.1-201ENST00000605266 382 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC128687.1-201ENST00000605304 619 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC055876.5-201ENST00000605667 259 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC006270.3-201ENST00000605967 1036 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC080013.3-201ENST00000606839 578 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AC090246.1-201ENST00000616499 426 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
RHBDL3P58872 AC231657.1-201ENST00000624313 397 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDL3P58872 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RHBDL3P58872 AC015813.6-201ENST00000624409 5808 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RHBDL3P58872 AC097714.1-201ENST00000511272 1647 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDL3P58872 AC105074.1-201ENST00000623380 3095 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 AC087190.4-201ENST00000574616 8334 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RHBDL3P58872 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RHBDL3P58872 SNORA31-201ENST00000362607 130 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 U3.29-201ENST00000391296 212 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.97□□□□□ -1.61
RHBDL3P58872 RNU2-15P-201ENST00000410692 191 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 RPS7P15-201ENST00000415804 584 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RHBDL3P58872 NECAP1P2-201ENST00000455668 727 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 ANKRD26P4-201ENST00000455755 950 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDL3P58872 VN1R105P-201ENST00000486595 910 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDL3P58872 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 IGHV3-32-201ENST00000519182 355 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDL3P58872 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDL3P58872 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDL3P58872 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDL3P58872 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.97□□□□□ -1.61
RHBDL3P58872 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDL3P58872 AC053481.3-201ENST00000577881 843 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 AC053481.4-201ENST00000583164 216 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 SNORD84-203ENST00000584275 78 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 MAGOH2P-202ENST00000584384 429 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDL3P58872 AC010738.1-201ENST00000604970 987 ntBASIC4.97□□□□□ -1.61
RHBDL3P58872 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.97□□□□□ -1.61
RHBDL3P58872 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
RHBDL3P58872 AC116667.1-201ENST00000604855 2072 ntBASIC4.96□□□□□ -1.61
RHBDL3P58872 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.96□□□□□ -1.61
RHBDL3P58872 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RHBDL3P58872 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
RHBDL3P58872 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.96□□□□□ -1.61
RHBDL3P58872 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDL3P58872 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDL3P58872 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RHBDL3P58872 RNA5SP258-201ENST00000362750 119 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 MIR195-201ENST00000385194 87 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 MIR607-201ENST00000385241 96 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RHBDL3P58872 SNORA48.7-201ENST00000391302 135 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 MTCO2P21-201ENST00000419780 677 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC019178.2-201ENST00000423595 505 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 OR8F1P-201ENST00000425243 930 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDL3P58872 AC073335.1-201ENST00000427776 363 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDL3P58872 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDL3P58872 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.96□□□□□ -1.62
RHBDL3P58872 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.96□□□□□ -1.62
RHBDL3P58872 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.96□□□□□ -1.62
RHBDL3P58872 AC006011.1-201ENST00000442758 349 ntBASIC4.96□□□□□ -1.62
RHBDL3P58872 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms