Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF144AP50876 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF144AP50876 CDC27P2-201ENST00000425026 1922 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 ZNF72P-201ENST00000425869 1908 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF144AP50876 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF144AP50876 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF144AP50876 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF144AP50876 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF144AP50876 Y_RNA.126-201ENST00000363382 111 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 Y_RNA.291-201ENST00000364886 113 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 RNU6-806P-201ENST00000365147 105 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 Y_RNA.399-201ENST00000383955 105 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 RNU6-432P-201ENST00000384196 109 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 SNORA16.2-201ENST00000390991 127 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RNF144AP50876 U3.43-201ENST00000410734 213 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 RNA5SP107-201ENST00000411358 122 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF144AP50876 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF144AP50876 RPL21P112-201ENST00000434403 463 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF144AP50876 RPEP4-201ENST00000437636 602 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 GAPDHP37-201ENST00000442317 968 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AL031681.1-201ENST00000443304 400 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AC243772.1-201ENST00000451620 410 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 MTCO3P8-201ENST00000453691 755 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AC117503.1-201ENST00000472241 394 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF144AP50876 MINOS1P4-201ENST00000515470 318 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 RN7SKP67-201ENST00000515905 235 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 SNORA25.11-201ENST00000515935 105 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 SNORA40.15-201ENST00000516884 107 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AC022080.3-201ENST00000544433 482 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF144AP50876 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF144AP50876 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF144AP50876 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF144AP50876 MIR5188-201ENST00000583467 113 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF144AP50876 MIR212-201ENST00000586026 110 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AC008521.1-201ENST00000587471 187 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AC004805.3-201ENST00000603178 310 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AL138889.2-201ENST00000603883 242 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 AL138960.1-201ENST00000613838 513 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 MIR6085-201ENST00000618314 110 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 LINC02495-203ENST00000636704 242 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF144AP50876 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF144AP50876 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF144AP50876 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF144AP50876 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF144AP50876 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF144AP50876 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF144AP50876 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF144AP50876 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF144AP50876 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RNF144AP50876 AL355834.1-201ENST00000556602 3965 ntBASIC5.91□□□□□ -1.46
RNF144AP50876 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF144AP50876 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RNF144AP50876 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF144AP50876 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF144AP50876 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF144AP50876 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF144AP50876 BIN2P1-201ENST00000504996 1530 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF144AP50876 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF144AP50876 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RNF144AP50876 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RNF144AP50876 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF144AP50876 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF144AP50876 Y_RNA.462-201ENST00000384268 102 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 RNU6-1226P-201ENST00000384317 107 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 RNU6-393P-201ENST00000384475 107 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 HMGB3P7-201ENST00000400214 611 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 AC097374.1-203ENST00000400783 485 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 RNA5SP115-201ENST00000411160 107 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF144AP50876 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF144AP50876 REREP1Y-201ENST00000422655 198 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF144AP50876 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF144AP50876 REREP2Y-201ENST00000439103 200 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF144AP50876 RPL36AP13-201ENST00000457490 317 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 RN7SL502P-201ENST00000481857 290 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF144AP50876 AC011005.2-201ENST00000487324 359 ntBASIC5.9□□□□□ -1.46
RNF144AP50876 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms