Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL669831.4-202ENST00000590817 238 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CR1P49238 BNIP3P38-201ENST00000601117 544 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AL020997.3-201ENST00000602843 359 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC025588.3-201ENST00000604182 274 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC013468.1-201ENST00000608680 598 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AP004247.3-201ENST00000608682 624 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 XIST_intron.1-201ENST00000619444 68 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC106730.3-201ENST00000624568 641 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CX3CR1P49238 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 MTND5P31-201ENST00000419366 1374 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC007256.1-201ENST00000392253 2765 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CX3CR1P49238 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.12□□□□□ -1.91
CX3CR1P49238 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CX3CR1P49238 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CX3CR1P49238 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CX3CR1P49238 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CX3CR1P49238 RNU1-75P-201ENST00000347264 129 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 RAB28P1-201ENST00000411517 641 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.12□□□□□ -1.91
CX3CR1P49238 SDCBPP2-201ENST00000424643 885 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 ARF4P2-201ENST00000430209 526 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 USP9YP31-201ENST00000431405 881 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.12□□□□□ -1.91
CX3CR1P49238 RPS7P2-201ENST00000435134 607 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.12□□□□□ -1.91
CX3CR1P49238 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
CX3CR1P49238 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CR1P49238 RPS24P6-201ENST00000452670 400 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 HMGN3P1-201ENST00000453847 193 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CR1P49238 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CR1P49238 AC010401.1-201ENST00000463867 348 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC010285.1-201ENST00000470580 392 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 PRDX3P4-201ENST00000470828 747 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.12□□□□□ -1.91
CX3CR1P49238 AL049830.2-201ENST00000480072 201 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CR1P49238 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CX3CR1P49238 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CR1P49238 NPM1P41-201ENST00000512920 831 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CX3CR1P49238 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.12□□□□□ -1.91
CX3CR1P49238 AC007991.1-201ENST00000522680 631 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CR1P49238 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CR1P49238 AP003385.6-201ENST00000531603 374 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC011602.1-201ENST00000546484 331 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.12□□□□□ -1.91
CX3CR1P49238 AL389895.1-201ENST00000554127 252 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.12□□□□□ -1.91
CX3CR1P49238 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.12□□□□□ -1.91
CX3CR1P49238 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AL671309.1-201ENST00000603750 544 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AC099676.1-201ENST00000608886 657 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 AP003355.3-201ENST00000623465 114 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 MFSD8-236ENST00000641509 4050 ntBASIC3.12□□□□□ -1.91
CX3CR1P49238 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.12□□□□□ -1.91
CX3CR1P49238 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CX3CR1P49238 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.11□□□□□ -1.91
CX3CR1P49238 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CR1P49238 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CR1P49238 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CX3CR1P49238 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CR1P49238 AC068647.1-201ENST00000489539 2265 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 MIR16-2-201ENST00000362117 81 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CR1P49238 PTMAP5-201ENST00000393073 333 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 MTCO3P31-201ENST00000405526 789 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 RPL23AP47-201ENST00000408017 460 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 RN7SKP263-201ENST00000411194 309 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.11□□□□□ -1.91
CX3CR1P49238 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.11□□□□□ -1.91
CX3CR1P49238 AC009237.2-201ENST00000421358 284 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AL121882.1-201ENST00000422893 417 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 HSFY1P1-201ENST00000423928 1178 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CR1P49238 NEK4P1-201ENST00000433383 879 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CR1P49238 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CR1P49238 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.11□□□□□ -1.91
CX3CR1P49238 RPL7P55-201ENST00000450522 746 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AL353718.1-201ENST00000451028 517 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 NPM1P13-201ENST00000452663 865 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 RPS4XP6-201ENST00000477670 797 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AL024509.2-201ENST00000493462 493 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 FCF1P3-201ENST00000496394 590 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CR1P49238 HMGN1P11-201ENST00000508668 303 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 COL6A4P2-205ENST00000509855 506 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AC025768.1-201ENST00000510057 267 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 MTCO2P32-201ENST00000514865 403 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CR1P49238 SNORA31.20-201ENST00000517111 133 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms