Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD4P46934 SNORA70.19-201ENST00000516717 90 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.99□□□□□ -1.77
NEDD4P46934 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 AC006518.2-201ENST00000542513 940 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.99□□□□□ -1.77
NEDD4P46934 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD4P46934 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD4P46934 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 AC024220.1-201ENST00000603675 484 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 AC004777.1-201ENST00000624317 287 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 AC010608.3-201ENST00000625048 527 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 AP003485.1-201ENST00000625093 753 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.99□□□□□ -1.77
NEDD4P46934 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.99□□□□□ -1.77
NEDD4P46934 AC017104.5-201ENST00000637647 639 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 USP8P1-201ENST00000494673 3183 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD4P46934 RNU1-70P-201ENST00000362618 164 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 AC019155.1-201ENST00000382242 574 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 RNU6-178P-201ENST00000384631 104 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 MIR7-3-201ENST00000384898 110 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD4P46934 HSPD1P16-201ENST00000402302 394 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD4P46934 RNU6-55P-201ENST00000411092 107 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 RNA5SP31-201ENST00000411144 127 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 RNU6-954P-201ENST00000411355 107 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.98□□□□□ -1.77
NEDD4P46934 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NEDD4P46934 EIF4A1P11-201ENST00000451239 222 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 AC097262.1-201ENST00000452559 548 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 CDC42P1-201ENST00000456658 548 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 RPL7P38-201ENST00000488396 739 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 HSPD1P15-201ENST00000505573 1122 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.98□□□□□ -1.77
NEDD4P46934 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD4P46934 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.98□□□□□ -1.77
NEDD4P46934 AC090330.1-201ENST00000588646 764 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD4P46934 VN1R88P-201ENST00000596787 292 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 AL139286.1-201ENST00000604465 483 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.98□□□□□ -1.77
NEDD4P46934 AC013468.1-201ENST00000608680 598 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 AL592295.2-201ENST00000612578 206 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 CR392039.4-201ENST00000624968 501 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD4P46934 OR4G3P-201ENST00000633500 913 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD4P46934 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.98□□□□□ -1.77
NEDD4P46934 AL450326.2-201ENST00000421913 1962 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 AC104446.1-201ENST00000613728 1321 ntBASIC3.98□□□□□ -1.77
NEDD4P46934 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD4P46934 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD4P46934 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD4P46934 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD4P46934 MIR208A-201ENST00000362287 71 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD4P46934 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD4P46934 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.97□□□□□ -1.77
NEDD4P46934 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD4P46934 RNVU1-14-201ENST00000384770 164 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.97□□□□□ -1.77
NEDD4P46934 RPS7P15-201ENST00000415804 584 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC106883.1-201ENST00000418805 562 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD4P46934 AL451062.2-201ENST00000427515 271 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC005300.1-201ENST00000428401 373 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 BX679664.1-201ENST00000434429 253 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.97□□□□□ -1.77
NEDD4P46934 PRSS3P4-201ENST00000453323 162 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD4P46934 AC119751.1-201ENST00000513357 765 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC008562.1-201ENST00000521763 330 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD4P46934 ZNF971P-201ENST00000562068 1249 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC023824.3-201ENST00000569003 562 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC005412.1-201ENST00000580812 1049 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 MIR4276-201ENST00000584832 70 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AL022067.1-201ENST00000602426 454 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC091057.3-201ENST00000602684 733 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC069431.2-201ENST00000604149 1099 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 BNIP3P4-201ENST00000604946 565 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.97□□□□□ -1.77
NEDD4P46934 AL121652.1-201ENST00000608851 448 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC084824.4-201ENST00000620106 731 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC023510.2-201ENST00000622162 746 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AC092608.3-201ENST00000625017 386 ntBASIC3.97□□□□□ -1.77
NEDD4P46934 AL590396.4-201ENST00000636779 956 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms