Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC244505.7-201ENST00000599675 272 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 Z82195.1-201ENST00000604558 398 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AC093424.1-201ENST00000604999 338 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AC083809.1-201ENST00000615051 472 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 VN1R7P-201ENST00000619242 903 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.96□□□□□ -1.78
HNF4AP41235 AC104985.3-201ENST00000623479 597 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 MTND2P41-201ENST00000637599 773 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AL365440.1-201ENST00000436135 2167 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HNF4AP41235 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 MAPK10-373ENST00000641983 6772 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.95□□□□□ -1.78
HNF4AP41235 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.95□□□□□ -1.78
HNF4AP41235 AL121657.1-201ENST00000327215 531 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 RNA5SP258-201ENST00000362750 119 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HNF4AP41235 MCTS2P-201ENST00000394552 546 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AP000567.1-201ENST00000406413 156 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 RN7SKP56-201ENST00000410513 331 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 FCF1P2-201ENST00000415284 583 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 RAD23BP2-201ENST00000416003 1207 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AIMP1P1-201ENST00000418670 937 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.95□□□□□ -1.78
HNF4AP41235 MTCO1P54-201ENST00000430139 712 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AC005345.1-201ENST00000431868 217 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AL035246.1-201ENST00000433554 1255 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.95□□□□□ -1.78
HNF4AP41235 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.95□□□□□ -1.78
HNF4AP41235 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HNF4AP41235 TPT1P12-201ENST00000448968 492 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 RPL38P1-201ENST00000460914 211 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AC020898.1-201ENST00000474167 787 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AL024509.2-201ENST00000493462 493 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 HMGB3P15-201ENST00000507326 574 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 AC112673.1-201ENST00000513168 575 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 RN7SKP122-201ENST00000515923 296 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.95□□□□□ -1.78
HNF4AP41235 AP003730.1-201ENST00000524605 285 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 OR8I1P-201ENST00000529291 931 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.95□□□□□ -1.78
HNF4AP41235 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.95□□□□□ -1.78
HNF4AP41235 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 SYF2P1-201ENST00000550658 413 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 MTND3P12-201ENST00000559068 328 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.95□□□□□ -1.78
HNF4AP41235 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.95□□□□□ -1.78
HNF4AP41235 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.95□□□□□ -1.78
HNF4AP41235 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.95□□□□□ -1.78
HNF4AP41235 AC234772.3-201ENST00000602277 528 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AL451044.1-201ENST00000604867 238 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AC128687.1-201ENST00000605304 619 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AP000238.1-201ENST00000608759 426 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 AC006338.2-201ENST00000616864 791 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 MIR8059-201ENST00000620427 81 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 AC009318.4-201ENST00000620496 486 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.95□□□□□ -1.78
HNF4AP41235 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.95□□□□□ -1.78
HNF4AP41235 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
HNF4AP41235 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.95□□□□□ -1.78
HNF4AP41235 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HNF4AP41235 FAM35DP-201ENST00000323387 2712 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HNF4AP41235 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HNF4AP41235 OTUD4P1-201ENST00000237841 3067 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HNF4AP41235 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HNF4AP41235 AL353746.1-201ENST00000566293 6881 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HNF4AP41235 RNU6-251P-201ENST00000363235 104 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 SNORD35B-201ENST00000363660 87 ntBASIC3.94□□□□□ -1.78
HNF4AP41235 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HNF4AP41235 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HNF4AP41235 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HNF4AP41235 RNU11-4P-201ENST00000391149 133 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms