Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC090312.2-201ENST00000582687 378 ntBASIC3.42□□□□□ -1.86
RORAP35398 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.42□□□□□ -1.86
RORAP35398 AC125494.3-201ENST00000602759 455 ntBASIC3.42□□□□□ -1.86
RORAP35398 AL671309.1-201ENST00000603750 544 ntBASIC3.42□□□□□ -1.86
RORAP35398 AL021368.1-201ENST00000607490 540 ntBASIC3.42□□□□□ -1.86
RORAP35398 STMN1P1-201ENST00000617809 440 ntBASIC3.42□□□□□ -1.86
RORAP35398 FRG1HP-204ENST00000617940 757 ntBASIC3.42□□□□□ -1.86
RORAP35398 AL163051.2-201ENST00000618976 735 ntBASIC3.42□□□□□ -1.86
RORAP35398 AC069209.1-201ENST00000619282 651 ntBASIC3.42□□□□□ -1.86
RORAP35398 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.42□□□□□ -1.86
RORAP35398 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RORAP35398 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RORAP35398 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RORAP35398 AC104446.1-201ENST00000613728 1321 ntBASIC3.42□□□□□ -1.86
RORAP35398 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RORAP35398 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.41□□□□□ -1.86
RORAP35398 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RORAP35398 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.41□□□□□ -1.86
RORAP35398 CR381670.1-201ENST00000624291 1693 ntBASIC3.41□□□□□ -1.86
RORAP35398 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RORAP35398 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RORAP35398 RNU6-335P-201ENST00000364563 113 ntBASIC3.41□□□□□ -1.86
RORAP35398 RNU6-761P-201ENST00000384148 107 ntBASIC3.41□□□□□ -1.86
RORAP35398 MIR184-201ENST00000384962 84 ntBASIC3.41□□□□□ -1.86
RORAP35398 USP9YP19-201ENST00000412165 485 ntBASIC3.41□□□□□ -1.86
RORAP35398 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.41□□□□□ -1.86
RORAP35398 MTCYBP24-201ENST00000420387 1106 ntBASIC3.41□□□□□ -1.86
RORAP35398 RPL31P12-201ENST00000422587 358 ntBASIC3.41□□□□□ -1.86
RORAP35398 VDAC1P3-201ENST00000434069 851 ntBASIC3.41□□□□□ -1.86
RORAP35398 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.41□□□□□ -1.86
RORAP35398 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.41□□□□□ -1.86
RORAP35398 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.41□□□□□ -1.86
RORAP35398 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.41□□□□□ -1.86
RORAP35398 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.41□□□□□ -1.86
RORAP35398 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.41□□□□□ -1.86
RORAP35398 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.41□□□□□ -1.86
RORAP35398 U3.44-201ENST00000458938 192 ntBASIC3.41□□□□□ -1.86
RORAP35398 RPL23AP44-201ENST00000482216 473 ntBASIC3.41□□□□□ -1.86
RORAP35398 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.41□□□□□ -1.86
RORAP35398 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.41□□□□□ -1.86
RORAP35398 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RORAP35398 AC008565.1-201ENST00000509046 885 ntBASIC3.41□□□□□ -1.86
RORAP35398 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RORAP35398 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.41□□□□□ -1.86
RORAP35398 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.41□□□□□ -1.86
RORAP35398 RN7SKP83-201ENST00000516512 178 ntBASIC3.41□□□□□ -1.86
RORAP35398 SNORA70.18-201ENST00000516696 98 ntBASIC3.41□□□□□ -1.86
RORAP35398 RNU6-579P-201ENST00000516879 102 ntBASIC3.41□□□□□ -1.86
RORAP35398 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.41□□□□□ -1.86
RORAP35398 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.41□□□□□ -1.86
RORAP35398 AC083923.1-201ENST00000523708 376 ntBASIC3.41□□□□□ -1.86
RORAP35398 TRAV15-201ENST00000556680 249 ntBASIC3.41□□□□□ -1.86
RORAP35398 AC027104.1-201ENST00000563702 681 ntBASIC3.41□□□□□ -1.86
RORAP35398 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.41□□□□□ -1.86
RORAP35398 AC099489.2-201ENST00000574976 260 ntBASIC3.41□□□□□ -1.86
RORAP35398 AC006116.10-201ENST00000591836 581 ntBASIC3.41□□□□□ -1.86
RORAP35398 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.41□□□□□ -1.86
RORAP35398 RMST_8.1-201ENST00000610287 165 ntBASIC3.41□□□□□ -1.86
RORAP35398 AC024595.1-201ENST00000623088 387 ntBASIC3.41□□□□□ -1.86
RORAP35398 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RORAP35398 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.41□□□□□ -1.86
RORAP35398 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RORAP35398 AC021755.1-201ENST00000559747 1447 ntBASIC3.41□□□□□ -1.86
RORAP35398 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.4□□□□□ -1.86
RORAP35398 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RORAP35398 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RORAP35398 ENSAP3-201ENST00000312710 333 ntBASIC3.4□□□□□ -1.87
RORAP35398 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RORAP35398 MIR490-201ENST00000384865 128 ntBASIC3.4□□□□□ -1.87
RORAP35398 AL138880.1-201ENST00000405824 642 ntBASIC3.4□□□□□ -1.87
RORAP35398 RPL23AP47-201ENST00000408017 460 ntBASIC3.4□□□□□ -1.87
RORAP35398 RNU4-27P-201ENST00000410889 139 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC092745.2-202ENST00000411880 369 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.4□□□□□ -1.87
RORAP35398 SDCBPP2-201ENST00000424643 885 ntBASIC3.4□□□□□ -1.87
RORAP35398 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 ATP5JP1-201ENST00000431631 322 ntBASIC3.4□□□□□ -1.87
RORAP35398 NDUFB1P1-201ENST00000435191 180 ntBASIC3.4□□□□□ -1.87
RORAP35398 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.4□□□□□ -1.87
RORAP35398 Z77249.1-201ENST00000444622 1175 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 CYCSP35-201ENST00000451978 304 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.4□□□□□ -1.87
RORAP35398 AP002884.2-201ENST00000471647 395 ntBASIC3.4□□□□□ -1.87
RORAP35398 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RORAP35398 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.4□□□□□ -1.87
RORAP35398 AC073522.1-201ENST00000483312 377 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.4□□□□□ -1.87
RORAP35398 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RORAP35398 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 AC025768.1-201ENST00000510057 267 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC074250.1-201ENST00000511117 192 ntBASIC3.4□□□□□ -1.87
RORAP35398 ARL2BPP6-201ENST00000512757 439 ntBASIC3.4□□□□□ -1.87
RORAP35398 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 HIGD1AP3-201ENST00000515857 278 ntBASIC3.4□□□□□ -1.87
RORAP35398 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
RORAP35398 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.4□□□□□ -1.87
RORAP35398 RPL12P22-201ENST00000519073 490 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms