Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL391497.1-201ENST00000608671 547 ntBASIC3.85□□□□□ -1.79
CHRNA3P32297 AL592295.2-201ENST00000612578 206 ntBASIC3.85□□□□□ -1.79
CHRNA3P32297 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.85□□□□□ -1.79
CHRNA3P32297 AC012442.3-202ENST00000636742 206 ntBASIC3.85□□□□□ -1.79
CHRNA3P32297 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.85□□□□□ -1.79
CHRNA3P32297 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA3P32297 MTND4P9-201ENST00000507819 1346 ntBASIC3.85□□□□□ -1.79
CHRNA3P32297 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA3P32297 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.85□□□□□ -1.79
CHRNA3P32297 AC024560.2-201ENST00000507981 1497 ntBASIC3.85□□□□□ -1.79
CHRNA3P32297 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CHRNA3P32297 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.85□□□□□ -1.79
CHRNA3P32297 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHRNA3P32297 AL359893.1-201ENST00000447628 1580 ntBASIC3.85□□□□□ -1.79
CHRNA3P32297 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.84□□□□□ -1.79
CHRNA3P32297 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA3P32297 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.84□□□□□ -1.79
CHRNA3P32297 PRO1804-201ENST00000623780 2050 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 RNU2-37P-201ENST00000410695 177 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 AC233981.1-201ENST00000423224 461 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 AC096632.1-201ENST00000427395 310 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 RPL7P15-201ENST00000461190 712 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 AC092451.1-201ENST00000480211 153 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 ACTG1P13-201ENST00000486987 1043 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 CAB39P1-201ENST00000502277 460 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA3P32297 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA3P32297 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA3P32297 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHRNA3P32297 SNORA70.14-201ENST00000516205 110 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 OR5D17P-201ENST00000531492 978 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.84□□□□□ -1.79
CHRNA3P32297 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.84□□□□□ -1.79
CHRNA3P32297 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.84□□□□□ -1.79
CHRNA3P32297 IGHV3-29-201ENST00000604817 344 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 AL391834.2-201ENST00000609982 546 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 AL392048.1-201ENST00000613946 534 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CHRNA3P32297 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CHRNA3P32297 MTND5P31-201ENST00000419366 1374 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 ZNF37BP-203ENST00000452306 1352 ntBASIC3.84□□□□□ -1.79
CHRNA3P32297 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CHRNA3P32297 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CHRNA3P32297 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
CHRNA3P32297 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 AL133383.2-201ENST00000622958 2336 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.83□□□□□ -1.8
CHRNA3P32297 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 RNA5SP42-201ENST00000364278 115 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 SNORA7.2-201ENST00000364446 145 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 RNU6-1226P-201ENST00000384317 107 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 RNU6-1257P-201ENST00000384625 110 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 MIR184-201ENST00000384962 84 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 MIR607-201ENST00000385241 96 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 MIR16-1-201ENST00000385271 89 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CHRNA3P32297 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 AL136116.1-201ENST00000403591 381 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 MTHFD2P2-201ENST00000407725 247 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 AC246680.2-201ENST00000422106 389 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 DEFB130D-201ENST00000426866 237 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA3P32297 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA3P32297 AC006994.1-201ENST00000438212 839 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 SETD6P1-201ENST00000444575 317 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA3P32297 AC004801.2-202ENST00000463559 283 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 AC091564.1-201ENST00000464563 479 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 PRDX3P4-201ENST00000470828 747 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 AC022034.3-201ENST00000471393 478 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 TMED11P-201ENST00000479478 690 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 RPL31P13-201ENST00000484151 370 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 AC068305.1-201ENST00000497406 726 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 UBE2CP3-201ENST00000502715 450 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 RN7SKP60-201ENST00000516985 239 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 SCARNA1-201ENST00000517138 166 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA3P32297 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA3P32297 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.83□□□□□ -1.8
CHRNA3P32297 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.83□□□□□ -1.8
CHRNA3P32297 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.83□□□□□ -1.8
CHRNA3P32297 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.83□□□□□ -1.8
CHRNA3P32297 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.83□□□□□ -1.8
CHRNA3P32297 MIR4644-201ENST00000579929 84 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 MIR5187-201ENST00000583479 76 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms