Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 GTF2IP9-201ENST00000502460 301 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 UBE2CP3-201ENST00000502715 450 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AC011352.3-201ENST00000505162 593 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 BOLA3P3-201ENST00000505182 232 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC13P31276 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC13P31276 MYL12AP1-201ENST00000518490 515 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXC13P31276 IGKV2D-19-201ENST00000523346 262 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AC109635.4-202ENST00000531666 412 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXC13P31276 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.21□□□□□ -1.74
HOXC13P31276 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC13P31276 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.21□□□□□ -1.74
HOXC13P31276 AC011492.1-201ENST00000600023 315 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 BNIP3P38-201ENST00000601117 544 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC13P31276 AC018645.2-201ENST00000609151 472 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AL590282.1-201ENST00000610379 1136 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC13P31276 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.21□□□□□ -1.74
HOXC13P31276 AC092184.1-201ENST00000625042 715 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC13P31276 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC13P31276 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC13P31276 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC13P31276 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC13P31276 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC13P31276 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HOXC13P31276 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC13P31276 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC13P31276 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HOXC13P31276 AL359893.1-201ENST00000447628 1580 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC13P31276 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC13P31276 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC13P31276 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 RNU6-1226P-201ENST00000384317 107 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 U8.11-201ENST00000384699 133 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 U8.12-201ENST00000384701 133 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 AL603865.2-201ENST00000401679 213 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC13P31276 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC13P31276 AL365338.1-201ENST00000422282 858 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC13P31276 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC13P31276 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC13P31276 Z99714.1-201ENST00000450463 807 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 U8.18-201ENST00000459285 133 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 RPL29P14-201ENST00000495837 428 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC13P31276 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC13P31276 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC13P31276 RNU6-1073P-201ENST00000517182 106 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC13P31276 AC104417.1-201ENST00000523974 751 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC13P31276 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC13P31276 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC13P31276 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC13P31276 AC022968.1-201ENST00000567372 442 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC13P31276 RPL23AP87-202ENST00000573039 466 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC13P31276 AC104662.1-201ENST00000604448 511 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 AC097504.2-201ENST00000608088 454 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 AC015813.4-201ENST00000610469 179 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC13P31276 AC124312.6-202ENST00000623624 418 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC13P31276 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC13P31276 OR4G3P-201ENST00000633500 913 ntBASIC4.2□□□□□ -1.74
HOXC13P31276 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HOXC13P31276 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC13P31276 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC13P31276 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXC13P31276 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC13P31276 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC13P31276 AC012321.1-201ENST00000561622 1588 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC13P31276 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC13P31276 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC13P31276 RNU6-619P-201ENST00000365146 108 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXC13P31276 RNU6-441P-201ENST00000384545 106 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 MCTS2P-201ENST00000394552 546 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXC13P31276 AC096533.1-201ENST00000411645 353 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 LUZP4P1-201ENST00000415420 344 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 MTCO1P54-201ENST00000430139 712 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXC13P31276 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXC13P31276 MTND2P22-201ENST00000444325 1033 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXC13P31276 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXC13P31276 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXC13P31276 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXC13P31276 RNU7-170P-201ENST00000459303 61 ntBASIC4.19□□□□□ -1.74
HOXC13P31276 snoU13.3-201ENST00000459441 104 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms