Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MTCO3P44-201ENST00000510977 541 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 RNA5SP468-201ENST00000516782 93 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.12□□□□□ -1.91
UBCP0CG48 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.12□□□□□ -1.91
UBCP0CG48 AC004024.1-201ENST00000549244 247 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 DUXAP6-201ENST00000553858 601 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
UBCP0CG48 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.12□□□□□ -1.91
UBCP0CG48 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.12□□□□□ -1.91
UBCP0CG48 KATNBL1P5-201ENST00000605015 517 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AL365400.2-201ENST00000605604 902 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 HSPE1P14-201ENST00000605812 302 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 RNU1-30P-201ENST00000606575 163 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AC013468.1-201ENST00000608680 598 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AC112503.2-201ENST00000609005 552 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AL354976.1-201ENST00000613843 387 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.12□□□□□ -1.91
UBCP0CG48 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBCP0CG48 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.12□□□□□ -1.91
UBCP0CG48 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.12□□□□□ -1.91
UBCP0CG48 MFSD8-213ENST00000641134 1327 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.12□□□□□ -1.91
UBCP0CG48 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.12□□□□□ -1.91
UBCP0CG48 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.11□□□□□ -1.91
UBCP0CG48 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
UBCP0CG48 MTND5P27-201ENST00000428871 1720 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC004925.1-201ENST00000624256 2706 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.11□□□□□ -1.91
UBCP0CG48 RNU6-50P-201ENST00000362356 103 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.11□□□□□ -1.91
UBCP0CG48 MIR30B-201ENST00000384850 88 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 RNU4-78P-201ENST00000410940 126 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.11□□□□□ -1.91
UBCP0CG48 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.11□□□□□ -1.91
UBCP0CG48 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.11□□□□□ -1.91
UBCP0CG48 GLRXP1-201ENST00000423261 334 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 HSFY1P1-201ENST00000423928 1178 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC006548.1-201ENST00000427470 102 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 YY1P1-201ENST00000427625 668 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.11□□□□□ -1.91
UBCP0CG48 AL357552.1-201ENST00000445254 415 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 RPS3AP46-201ENST00000448352 682 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.11□□□□□ -1.91
UBCP0CG48 HMGB1P15-201ENST00000453854 435 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 TPRKBP1-201ENST00000456243 481 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.11□□□□□ -1.91
UBCP0CG48 ARPC3P2-201ENST00000457786 533 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 RPL23AP67-201ENST00000465341 474 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 NDUFA5P9-201ENST00000472609 340 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.11□□□□□ -1.91
UBCP0CG48 VN1R105P-201ENST00000486595 910 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AP000563.1-201ENST00000490865 758 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 SETP14-201ENST00000497538 873 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 OR5H5P-201ENST00000503164 928 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
UBCP0CG48 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.11□□□□□ -1.91
UBCP0CG48 MTCO1P35-201ENST00000515270 228 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 RN7SKP13-201ENST00000515933 244 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 RANP9-201ENST00000519957 271 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.11□□□□□ -1.91
UBCP0CG48 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.11□□□□□ -1.91
UBCP0CG48 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.11□□□□□ -1.91
UBCP0CG48 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.11□□□□□ -1.91
UBCP0CG48 AC104229.1-201ENST00000561364 255 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.11□□□□□ -1.91
UBCP0CG48 MIR4286-201ENST00000580651 93 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC053481.4-201ENST00000583164 216 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBCP0CG48 AL355812.1-201ENST00000603215 216 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 OR4H6P-202ENST00000603819 340 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 DPRXP5-201ENST00000604662 539 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC009948.4-201ENST00000604692 675 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AL513477.2-201ENST00000607858 568 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC107294.3-201ENST00000609211 526 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC090912.3-201ENST00000609775 533 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AL390240.1-201ENST00000612950 384 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 RMST_10.1-201ENST00000616309 154 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AC069209.1-201ENST00000619282 651 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 CR381572.1-201ENST00000625098 102 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 MFSD8-233ENST00000641482 4860 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 AL365440.1-201ENST00000436135 2167 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 MTND5P31-201ENST00000419366 1374 ntBASIC3.11□□□□□ -1.91
UBCP0CG48 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBCP0CG48 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.1□□□□□ -1.91
UBCP0CG48 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
UBCP0CG48 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBCP0CG48 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBCP0CG48 OR4A15-201ENST00000314706 1035 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 MIR30E-201ENST00000362104 92 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBCP0CG48 RPL32P23-201ENST00000397237 405 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 PPIAP31-201ENST00000405422 495 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
UBCP0CG48 RNA5SP107-201ENST00000411358 122 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 RAD23BP2-201ENST00000416003 1207 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms