Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RN7SL293P-201ENST00000481765 281 ntBASIC2.56□□□□□ -2
CTSDP07339 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.56□□□□□ -2
CTSDP07339 RPL21P129-201ENST00000491732 478 ntBASIC2.56□□□□□ -2
CTSDP07339 AC021678.1-201ENST00000505195 936 ntBASIC2.56□□□□□ -2
CTSDP07339 RN7SKP82-201ENST00000516786 223 ntBASIC2.56□□□□□ -2
CTSDP07339 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.56□□□□□ -2
CTSDP07339 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.56□□□□□ -2
CTSDP07339 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.56□□□□□ -2
CTSDP07339 MIR4429-201ENST00000580105 73 ntBASIC2.56□□□□□ -2
CTSDP07339 AC083760.1-201ENST00000589621 670 ntBASIC2.56□□□□□ -2
CTSDP07339 CCDC58P3-201ENST00000590792 430 ntBASIC2.56□□□□□ -2
CTSDP07339 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.56□□□□□ -2
CTSDP07339 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.56□□□□□ -2
CTSDP07339 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.56□□□□□ -2
CTSDP07339 AC008739.3-201ENST00000603262 127 ntBASIC2.56□□□□□ -2
CTSDP07339 RNA5SP108-201ENST00000605921 117 ntBASIC2.56□□□□□ -2
CTSDP07339 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.56□□□□□ -2
CTSDP07339 AC069234.5-201ENST00000611056 416 ntBASIC2.56□□□□□ -2
CTSDP07339 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.56□□□□□ -2
CTSDP07339 AL355365.1-201ENST00000616480 294 ntBASIC2.56□□□□□ -2
CTSDP07339 AC073348.1-201ENST00000623002 331 ntBASIC2.56□□□□□ -2
CTSDP07339 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.56□□□□□ -2
CTSDP07339 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.56□□□□□ -2
CTSDP07339 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.56□□□□□ -2
CTSDP07339 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.56□□□□□ -2
CTSDP07339 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.56□□□□□ -2
CTSDP07339 MTCO1P12-201ENST00000414273 1543 ntBASIC2.56□□□□□ -2
CTSDP07339 AC092435.3-201ENST00000565538 3654 ntBASIC2.56□□□□□ -2
CTSDP07339 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
CTSDP07339 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.55□□□□□ -2
CTSDP07339 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CTSDP07339 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTSDP07339 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
CTSDP07339 RNU6-618P-201ENST00000363518 112 ntBASIC2.55□□□□□ -2
CTSDP07339 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.55□□□□□ -2
CTSDP07339 AC234772.1-201ENST00000377927 937 ntBASIC2.55□□□□□ -2
CTSDP07339 SNORD88.1-201ENST00000408684 91 ntBASIC2.55□□□□□ -2
CTSDP07339 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.55□□□□□ -2
CTSDP07339 BX323014.1-201ENST00000412876 237 ntBASIC2.55□□□□□ -2
CTSDP07339 RPL7P10-201ENST00000417407 739 ntBASIC2.55□□□□□ -2
CTSDP07339 BTF3P9-201ENST00000418784 283 ntBASIC2.55□□□□□ -2
CTSDP07339 OR1AA1P-201ENST00000419597 916 ntBASIC2.55□□□□□ -2
CTSDP07339 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.55□□□□□ -2
CTSDP07339 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.55□□□□□ -2
CTSDP07339 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.55□□□□□ -2
CTSDP07339 AL662791.1-201ENST00000441992 928 ntBASIC2.55□□□□□ -2
CTSDP07339 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.55□□□□□ -2
CTSDP07339 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.55□□□□□ -2
CTSDP07339 MTCO3P17-201ENST00000443775 513 ntBASIC2.55□□□□□ -2
CTSDP07339 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.55□□□□□ -2
CTSDP07339 RPL21P41-201ENST00000459863 264 ntBASIC2.55□□□□□ -2
CTSDP07339 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CTSDP07339 RN7SL499P-201ENST00000481141 276 ntBASIC2.55□□□□□ -2
CTSDP07339 HMGB3P15-201ENST00000507326 574 ntBASIC2.55□□□□□ -2
CTSDP07339 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.55□□□□□ -2
CTSDP07339 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
CTSDP07339 ACTR6P1-201ENST00000514311 1104 ntBASIC2.55□□□□□ -2
CTSDP07339 AC034244.2-201ENST00000514668 858 ntBASIC2.55□□□□□ -2
CTSDP07339 DUXAP2-201ENST00000519198 589 ntBASIC2.55□□□□□ -2
CTSDP07339 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.55□□□□□ -2
CTSDP07339 AC007458.1-201ENST00000542812 373 ntBASIC2.55□□□□□ -2
CTSDP07339 AC011611.1-201ENST00000552179 197 ntBASIC2.55□□□□□ -2
CTSDP07339 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.55□□□□□ -2
CTSDP07339 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.55□□□□□ -2
CTSDP07339 LLPHP1-201ENST00000603571 367 ntBASIC2.55□□□□□ -2
CTSDP07339 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.55□□□□□ -2
CTSDP07339 AC117490.2-201ENST00000610042 594 ntBASIC2.55□□□□□ -2
CTSDP07339 AC105429.2-201ENST00000610567 517 ntBASIC2.55□□□□□ -2
CTSDP07339 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CTSDP07339 Z99129.2-201ENST00000619967 314 ntBASIC2.55□□□□□ -2
CTSDP07339 AC006065.5-201ENST00000623427 349 ntBASIC2.55□□□□□ -2
CTSDP07339 LRRC77P-213ENST00000637727 880 ntBASIC2.55□□□□□ -2
CTSDP07339 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
CTSDP07339 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTSDP07339 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CTSDP07339 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CTSDP07339 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.54□□□□□ -2
CTSDP07339 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.54□□□□□ -2
CTSDP07339 AL359715.4-201ENST00000606629 1436 ntBASIC2.54□□□□□ -2
CTSDP07339 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CTSDP07339 MIR23B-201ENST00000384832 97 ntBASIC2.54□□□□□ -2
CTSDP07339 MIR490-201ENST00000384865 128 ntBASIC2.54□□□□□ -2
CTSDP07339 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CTSDP07339 AL451074.5-201ENST00000415894 435 ntBASIC2.54□□□□□ -2
CTSDP07339 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.54□□□□□ -2
CTSDP07339 AC104332.2-201ENST00000429959 156 ntBASIC2.54□□□□□ -2
CTSDP07339 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.54□□□□□ -2
CTSDP07339 AL592437.1-201ENST00000443781 492 ntBASIC2.54□□□□□ -2
CTSDP07339 AL353898.1-201ENST00000444055 238 ntBASIC2.54□□□□□ -2
CTSDP07339 AC104629.2-201ENST00000468627 598 ntBASIC2.54□□□□□ -2
CTSDP07339 RPS17P11-201ENST00000474297 293 ntBASIC2.54□□□□□ -2
CTSDP07339 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.54□□□□□ -2
CTSDP07339 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.54□□□□□ -2
CTSDP07339 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.54□□□□□ -2
CTSDP07339 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.54□□□□□ -2
CTSDP07339 AC025857.1-201ENST00000525252 377 ntBASIC2.54□□□□□ -2
CTSDP07339 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.54□□□□□ -2
CTSDP07339 RN7SL339P-201ENST00000580597 296 ntBASIC2.54□□□□□ -2
CTSDP07339 ZNF415P1-201ENST00000582279 1166 ntBASIC2.54□□□□□ -2
CTSDP07339 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms