Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.96□□□□□ -1.78
COL2A1P02458 RPL12P50-201ENST00000603116 116 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 AC002487.1-201ENST00000604565 994 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 KATNBL1P5-201ENST00000605015 517 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 AC124016.2-201ENST00000610058 665 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.96□□□□□ -1.78
COL2A1P02458 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.96□□□□□ -1.78
COL2A1P02458 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL2A1P02458 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL2A1P02458 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL2A1P02458 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL2A1P02458 CR383658.2-201ENST00000547576 1525 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL2A1P02458 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL2A1P02458 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.95□□□□□ -1.78
COL2A1P02458 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL2A1P02458 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.95□□□□□ -1.78
COL2A1P02458 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
COL2A1P02458 MTND4P8-201ENST00000514997 1362 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL2A1P02458 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
COL2A1P02458 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL2A1P02458 SNORD116-8-201ENST00000384365 95 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 RNU6-298P-201ENST00000390888 96 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 GSTA8P-201ENST00000404253 637 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AL512504.1-201ENST00000415494 778 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.95□□□□□ -1.78
COL2A1P02458 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
COL2A1P02458 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.95□□□□□ -1.78
COL2A1P02458 MUPP-201ENST00000438111 566 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 AC097262.1-201ENST00000452559 548 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 MTCO3P20-201ENST00000454926 688 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 KC877373.1-201ENST00000479066 408 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 AC118282.2-201ENST00000508739 374 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.95□□□□□ -1.78
COL2A1P02458 RNU5A-7P-201ENST00000515979 116 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 RNU6-276P-201ENST00000516114 96 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 RPL12P22-201ENST00000519073 490 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AL390334.1-201ENST00000556395 450 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.95□□□□□ -1.78
COL2A1P02458 AC061975.8-201ENST00000587058 721 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AL451007.1-201ENST00000595491 289 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.95□□□□□ -1.78
COL2A1P02458 AL606834.3-201ENST00000602615 496 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AL109653.1-201ENST00000603091 248 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 AL365400.2-201ENST00000605604 902 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.95□□□□□ -1.78
COL2A1P02458 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.95□□□□□ -1.78
COL2A1P02458 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL2A1P02458 CR381670.1-201ENST00000624291 1693 ntBASIC3.95□□□□□ -1.78
COL2A1P02458 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
COL2A1P02458 AC093536.2-201ENST00000565257 1406 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.94□□□□□ -1.78
COL2A1P02458 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.94□□□□□ -1.78
COL2A1P02458 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL2A1P02458 ZNF807-201ENST00000328088 1707 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
COL2A1P02458 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
COL2A1P02458 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL2A1P02458 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL2A1P02458 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.94□□□□□ -1.78
COL2A1P02458 RNA5SP235-201ENST00000365411 114 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.94□□□□□ -1.78
COL2A1P02458 RNU1-89P-201ENST00000384592 164 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.94□□□□□ -1.78
COL2A1P02458 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.94□□□□□ -1.78
COL2A1P02458 RPS6P15-201ENST00000431996 751 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.94□□□□□ -1.78
COL2A1P02458 AC107083.1-201ENST00000439643 279 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 MTND1P1-201ENST00000445453 368 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC112492.1-201ENST00000449607 712 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 USP9YP10-201ENST00000454868 628 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.94□□□□□ -1.78
COL2A1P02458 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.94□□□□□ -1.78
COL2A1P02458 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.94□□□□□ -1.78
COL2A1P02458 USP9YP5-201ENST00000511770 630 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC023141.12-201ENST00000512399 199 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 RNU6-311P-201ENST00000516224 102 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC091163.3-201ENST00000518269 1144 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.94□□□□□ -1.78
COL2A1P02458 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.94□□□□□ -1.78
COL2A1P02458 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
COL2A1P02458 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.94□□□□□ -1.78
COL2A1P02458 AL356057.1-201ENST00000533798 831 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AP003717.3-201ENST00000544832 1180 ntBASIC3.94□□□□□ -1.78
COL2A1P02458 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.94□□□□□ -1.78
COL2A1P02458 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.94□□□□□ -1.78
COL2A1P02458 Z99497.2-201ENST00000603634 310 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms