Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MIR3691-201ENST00000578066 90 ntBASIC6.65□□□□□ -1.34
ALDH1A1P00352 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
ALDH1A1P00352 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
ALDH1A1P00352 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.65□□□□□ -1.34
ALDH1A1P00352 AC092447.9-201ENST00000603395 144 ntBASIC6.65□□□□□ -1.34
ALDH1A1P00352 AL731566.2-201ENST00000618971 317 ntBASIC6.65□□□□□ -1.34
ALDH1A1P00352 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.65□□□□□ -1.34
ALDH1A1P00352 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
ALDH1A1P00352 AC092692.1-201ENST00000623625 2595 ntBASIC6.65□□□□□ -1.34
ALDH1A1P00352 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ALDH1A1P00352 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
ALDH1A1P00352 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
ALDH1A1P00352 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
ALDH1A1P00352 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
ALDH1A1P00352 USP9YP4-201ENST00000424401 1745 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 Y_RNA.106-201ENST00000363189 100 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 Y_RNA.404-201ENST00000383978 102 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 Y_RNA.428-201ENST00000384078 102 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 RNU6-662P-201ENST00000384253 104 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 Y_RNA.477-201ENST00000384352 108 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 RNU1-77P-201ENST00000390868 162 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 AC243428.1-201ENST00000421099 264 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 RPS15AP10-201ENST00000432472 382 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 PSMD10P3-201ENST00000437000 448 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 RPL36AP15-201ENST00000444514 266 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 MTND4LP30-201ENST00000454092 297 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 PCMTD1P1-201ENST00000455560 355 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 FO393415.2-201ENST00000480085 343 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 RN7SL447P-201ENST00000494711 245 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 RN7SKP98-201ENST00000517070 156 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 MTND4P7-201ENST00000523876 130 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 AC128657.1-201ENST00000549459 145 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 uc_338.26-201ENST00000612659 160 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 AC010378.1-201ENST00000619270 362 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 AC110597.1-201ENST00000562669 3176 ntBASIC6.64□□□□□ -1.35
ALDH1A1P00352 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.64□□□□□ -1.35
ALDH1A1P00352 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ALDH1A1P00352 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ALDH1A1P00352 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ALDH1A1P00352 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.63□□□□□ -1.35
ALDH1A1P00352 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
ALDH1A1P00352 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ALDH1A1P00352 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ALDH1A1P00352 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ALDH1A1P00352 HSPE1P11-201ENST00000339579 310 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 Y_RNA.150-201ENST00000363562 102 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 SNORA62.1-201ENST00000364287 154 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 Y_RNA.483-201ENST00000384380 101 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 Y_RNA.485-201ENST00000384395 102 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 MIR320B1-201ENST00000390209 79 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
ALDH1A1P00352 AL109941.1-201ENST00000401925 229 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 AL391417.1-201ENST00000404100 426 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 MIR1302-6-201ENST00000408466 90 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 AL132765.1-201ENST00000434165 553 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 MTATP6P16-201ENST00000434543 526 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 AC096775.1-201ENST00000437724 448 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 AC092013.1-201ENST00000438795 332 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 NAMPTP1-201ENST00000440465 2514 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 AL663074.2-201ENST00000440621 479 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 RNF6P1-201ENST00000444889 1784 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 RPS27AP3-201ENST00000453803 454 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.63□□□□□ -1.35
ALDH1A1P00352 AC005008.1-201ENST00000456151 612 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 RPS18P6-201ENST00000476880 458 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ALDH1A1P00352 THAP12P9-201ENST00000503971 2360 ntBASIC6.63□□□□□ -1.35
ALDH1A1P00352 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms