Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 CRYM-AS1-204ENST00000637983 556 ntBASIC4.62□□□□□ -1.67
PROM1O43490 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
PROM1O43490 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PROM1O43490 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.62□□□□□ -1.67
PROM1O43490 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PROM1O43490 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PROM1O43490 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PROM1O43490 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PROM1O43490 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PROM1O43490 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PROM1O43490 Y_RNA.88-201ENST00000363029 99 ntBASIC4.61□□□□□ -1.67
PROM1O43490 RNU4-12P-201ENST00000365233 139 ntBASIC4.61□□□□□ -1.67
PROM1O43490 SNORD115-47-201ENST00000391226 86 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.61□□□□□ -1.67
PROM1O43490 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.61□□□□□ -1.67
PROM1O43490 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.61□□□□□ -1.67
PROM1O43490 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.61□□□□□ -1.67
PROM1O43490 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.61□□□□□ -1.67
PROM1O43490 PRPF38AP2-201ENST00000438179 851 ntBASIC4.61□□□□□ -1.67
PROM1O43490 DNAJC19P4-201ENST00000440115 345 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.61□□□□□ -1.67
PROM1O43490 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.61□□□□□ -1.67
PROM1O43490 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PROM1O43490 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.61□□□□□ -1.67
PROM1O43490 FGF7P6-202ENST00000451282 293 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC098824.1-201ENST00000453565 980 ntBASIC4.61□□□□□ -1.67
PROM1O43490 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.61□□□□□ -1.67
PROM1O43490 snoU109.1-201ENST00000459339 135 ntBASIC4.61□□□□□ -1.67
PROM1O43490 RN7SL481P-201ENST00000477764 299 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC105252.1-201ENST00000503089 286 ntBASIC4.61□□□□□ -1.67
PROM1O43490 PRDX4P1-201ENST00000507189 574 ntBASIC4.61□□□□□ -1.67
PROM1O43490 NDUFB4P2-201ENST00000509515 391 ntBASIC4.61□□□□□ -1.67
PROM1O43490 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.61□□□□□ -1.67
PROM1O43490 RNA5SP249-201ENST00000516127 99 ntBASIC4.61□□□□□ -1.67
PROM1O43490 OR5M7P-201ENST00000526140 972 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC013828.2-201ENST00000532487 235 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.61□□□□□ -1.67
PROM1O43490 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.61□□□□□ -1.67
PROM1O43490 AP005205.1-201ENST00000563503 508 ntBASIC4.61□□□□□ -1.67
PROM1O43490 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PROM1O43490 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.61□□□□□ -1.67
PROM1O43490 SNORA74C-1-201ENST00000580726 201 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC011487.3-201ENST00000593607 453 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC008687.2-201ENST00000597865 520 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.61□□□□□ -1.67
PROM1O43490 AC131902.3-201ENST00000611767 581 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.61□□□□□ -1.67
PROM1O43490 AL022401.1-201ENST00000619498 108 ntBASIC4.61□□□□□ -1.67
PROM1O43490 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
PROM1O43490 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.61□□□□□ -1.67
PROM1O43490 CR381572.2-201ENST00000624852 397 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AP000843.1-201ENST00000624880 701 ntBASIC4.61□□□□□ -1.67
PROM1O43490 AC005609.4-201ENST00000625071 447 ntBASIC4.61□□□□□ -1.67
PROM1O43490 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.61□□□□□ -1.67
PROM1O43490 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PROM1O43490 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.61□□□□□ -1.67
PROM1O43490 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PROM1O43490 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PROM1O43490 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PROM1O43490 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.6□□□□□ -1.67
PROM1O43490 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.6□□□□□ -1.67
PROM1O43490 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 Y_RNA.97-201ENST00000363094 102 ntBASIC4.6□□□□□ -1.67
PROM1O43490 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 MIR192-201ENST00000384915 110 ntBASIC4.6□□□□□ -1.67
PROM1O43490 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PROM1O43490 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 AL356967.1-201ENST00000406305 431 ntBASIC4.6□□□□□ -1.67
PROM1O43490 VN1R8P-201ENST00000407739 893 ntBASIC4.6□□□□□ -1.67
PROM1O43490 RPS3AP24-201ENST00000407896 734 ntBASIC4.6□□□□□ -1.67
PROM1O43490 Y_RNA.598-201ENST00000410480 95 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC245052.5-201ENST00000416320 649 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.6□□□□□ -1.67
PROM1O43490 AC007742.1-201ENST00000425789 329 ntBASIC4.6□□□□□ -1.67
PROM1O43490 USP9YP18-201ENST00000425912 695 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 MTND3P21-201ENST00000433774 331 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC010881.1-201ENST00000433830 235 ntBASIC4.6□□□□□ -1.67
PROM1O43490 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC093414.1-201ENST00000434712 514 ntBASIC4.6□□□□□ -1.67
PROM1O43490 ELOCP26-201ENST00000436067 329 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.6□□□□□ -1.67
PROM1O43490 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 AC112498.1-201ENST00000444401 332 ntBASIC4.6□□□□□ -1.67
PROM1O43490 WASF1P1-201ENST00000447560 1131 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AL162388.1-201ENST00000450912 352 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC003071.1-201ENST00000451219 789 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 AC097493.1-201ENST00000463958 372 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC091564.1-201ENST00000464563 479 ntBASIC4.6□□□□□ -1.67
PROM1O43490 RPL21P71-201ENST00000465598 459 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms