Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM38O00635 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM38O00635 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
TRIM38O00635 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM38O00635 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM38O00635 AC090229.1-201ENST00000590983 1609 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM38O00635 AL391994.1-201ENST00000254724 282 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 RNU1-20P-201ENST00000363314 162 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 SNORA70E-201ENST00000384492 135 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 ATP5F1P3-201ENST00000397213 657 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 RPL23AP29-201ENST00000397284 453 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM38O00635 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 FCF1P9-201ENST00000412546 282 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM38O00635 AL592293.2-201ENST00000422292 996 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AL022400.1-201ENST00000423946 935 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC073335.1-201ENST00000427776 363 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 RBMX2P4-201ENST00000441256 376 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM38O00635 AC027673.1-201ENST00000456245 405 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 RPS15AP17-201ENST00000470598 390 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 LINC00888-204ENST00000487386 421 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 MTAPP1-201ENST00000489154 819 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM38O00635 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM38O00635 AC147055.4-201ENST00000504399 745 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM38O00635 ATP1B1P1-201ENST00000509767 915 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM38O00635 RN7SKP122-201ENST00000515923 296 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 RNU6-1178P-201ENST00000516674 107 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM38O00635 PDCD5P1-201ENST00000543528 309 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 MIR4637-201ENST00000582405 84 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 AC008759.1-201ENST00000589783 983 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 AL031985.2-201ENST00000600955 480 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AF131215.7-201ENST00000602443 707 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC106791.2-201ENST00000604680 391 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC010680.4-201ENST00000605334 543 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC243773.3-201ENST00000613270 256 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 MLECP1-201ENST00000615893 709 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 U6atac.1-201ENST00000616025 117 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 AL590240.3-201ENST00000621416 943 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AP006248.2-201ENST00000623309 592 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 MIR6830-201ENST00000636015 70 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC068137.3-201ENST00000639191 341 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 AC073869.6-201ENST00000640656 341 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM38O00635 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM38O00635 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM38O00635 PABPC1P7-201ENST00000413177 1513 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM38O00635 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM38O00635 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.65□□□□□ -1.66
TRIM38O00635 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.66
TRIM38O00635 AC025031.4-201ENST00000621248 3271 ntBASIC4.65□□□□□ -1.66
TRIM38O00635 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM38O00635 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM38O00635 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.65□□□□□ -1.66
TRIM38O00635 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
TRIM38O00635 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
TRIM38O00635 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
TRIM38O00635 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM38O00635 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM38O00635 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM38O00635 SNORA4.1-201ENST00000364263 144 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM38O00635 RNA5SP397-201ENST00000391323 118 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 AL590084.2-201ENST00000401481 382 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 HMGB1P17-201ENST00000403495 628 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM38O00635 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM38O00635 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.65□□□□□ -1.67
TRIM38O00635 MTCYBP38-201ENST00000417160 1123 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 AC019178.2-201ENST00000423595 505 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 PSMA2P3-201ENST00000429685 675 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 RPS17P8-201ENST00000434525 335 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 AC129850.1-201ENST00000436203 508 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 AP000542.1-201ENST00000448473 371 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM38O00635 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM38O00635 AC083829.1-201ENST00000503756 657 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 STMN1P2-201ENST00000508435 439 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM38O00635 AC134698.5-201ENST00000519444 336 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM38O00635 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM38O00635 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms