Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 PABPC1P7-201ENST00000413177 1513 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC130650.2-201ENST00000618736 2403 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AC107982.1-201ENST00000507171 1300 ntBASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA3F8WFD2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SAGE4P-201ENST00000442271 3381 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC008725.1-201ENST00000605123 2263 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC010733.2-201ENST00000589496 5702 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SNORA60-201ENST00000362396 134 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SNORD35B-201ENST00000363660 87 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SNORD116.1-201ENST00000365628 92 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 Y_RNA.408-201ENST00000383987 102 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 MT-TC-201ENST00000387405 66 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 ERHP2-201ENST00000402323 299 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 MIR1250-201ENST00000408098 113 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 RN7SKP159-201ENST00000410657 292 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 RNA5SP104-201ENST00000410989 118 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 PGBD4P8-201ENST00000412993 562 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 FABP3P2-201ENST00000453169 399 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC022034.3-201ENST00000471393 478 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC114322.1-201ENST00000506771 926 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 TMEM248P1-201ENST00000510579 951 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 MTCO1P30-201ENST00000515244 580 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AGGF1P5-201ENST00000567900 919 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC009101.1-201ENST00000568135 242 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 RPL23AP87-202ENST00000573039 466 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC025627.2-201ENST00000576220 160 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 MIR4644-201ENST00000579929 84 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AP001269.3-201ENST00000588718 329 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC112230.1-201ENST00000604342 547 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC245389.1-201ENST00000605141 529 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AP001521.1-201ENST00000609150 300 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC064801.1-201ENST00000612025 407 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 MIR7151-201ENST00000617477 60 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC006386.1-201ENST00000619436 415 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC092184.1-201ENST00000625042 715 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 AC016588.2-201ENST00000632484 3021 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 MTCO1P14-201ENST00000441695 1559 ntBASIC3.68□□□□□ -1.82
NPIPA3F8WFD2 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 Y_RNA.25-201ENST00000362528 102 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AL035246.1-201ENST00000433554 1255 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 Z80107.1-201ENST00000436830 412 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 PTENP1-201ENST00000447117 1215 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 SNRPGP5-201ENST00000456003 220 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 MTCO3P44-201ENST00000510977 541 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 RN7SKP31-201ENST00000516354 278 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms