Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL136164.3-201ENST00000624429 3978 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 OR52B1P-201ENST00000316506 909 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 Y_RNA.77-201ENST00000362962 107 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 SNORA26.8-201ENST00000391306 124 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 NPM1P11-201ENST00000417106 855 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL807761.1-201ENST00000417622 171 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL365184.2-201ENST00000431139 435 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 NDUFA12P1-201ENST00000455914 406 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL445433.1-201ENST00000457507 257 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AC116337.2-201ENST00000477662 156 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 OR2A20P-203ENST00000498397 1268 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 NDUFA5P2-201ENST00000519723 344 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 HIGD1AP10-201ENST00000527837 282 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 ROCK1P1-201ENST00000573767 549 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 PRELID3BP8-201ENST00000604148 295 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AC004853.1-201ENST00000604902 698 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL049536.1-201ENST00000625043 744 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 AL391684.1-202ENST00000641293 1636 ntBASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.25□□□□□ -1.57
COL4A3BPQ9Y5P4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU1-83P-201ENST00000363426 164 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 Y_RNA.234-201ENST00000364409 97 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AL356421.1-201ENST00000403255 413 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AL591848.1-201ENST00000413092 322 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC109780.2-201ENST00000413467 845 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 RPL7P57-201ENST00000423238 740 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC104651.2-201ENST00000447549 528 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 NDUFS5P3-201ENST00000450668 321 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AL645939.1-201ENST00000453429 797 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 OR6K1P-201ENST00000456766 971 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC108751.2-201ENST00000469993 231 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC006463.2-201ENST00000473326 348 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 S100A11P1-201ENST00000477525 312 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 SETP7-201ENST00000552169 453 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 MIR544B-201ENST00000582372 78 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AL365503.1-201ENST00000605247 905 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 HMGN2P28-201ENST00000606102 262 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 AC244517.1-201ENST00000606030 2086 ntBASIC5.24□□□□□ -1.57
COL4A3BPQ9Y5P4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms