Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 OR6R2P-201ENST00000609216 300 ntBASIC3.62□□□□□ -1.83
SCN11AQ9UI33 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 AC107081.3-201ENST00000612715 2034 ntBASIC3.62□□□□□ -1.83
SCN11AQ9UI33 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SCN11AQ9UI33 NEAT1-202ENST00000501122 22743 ntBASIC3.62□□□□□ -1.83
SCN11AQ9UI33 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AC019155.1-201ENST00000382242 574 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 MIR3074-201ENST00000384885 81 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AC005351.1-201ENST00000511152 786 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AP002812.4-201ENST00000532139 286 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AC022960.2-201ENST00000616300 666 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AL590808.1-201ENST00000618696 141 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 RNU6-805P-201ENST00000365643 106 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 MIR512-1-201ENST00000384913 84 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AL356057.3-201ENST00000402607 340 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AC073508.1-201ENST00000428866 656 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AC105402.2-201ENST00000438503 358 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 RPS20P32-201ENST00000456044 356 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 RN7SL442P-201ENST00000473804 320 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 UBL5P3-201ENST00000475112 231 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCN11AQ9UI33 AC243829.7-201ENST00000633081 225 ntBASIC3.61□□□□□ -1.83
SCN11AQ9UI33 PWAR6-201ENST00000552334 4618 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 AC004972.1-201ENST00000623934 2209 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 ASNSP3-201ENST00000451989 1306 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 RPL21P3-201ENST00000395517 478 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 RPL31P1-201ENST00000398116 372 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 SNORA79B-201ENST00000410557 148 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 RNA5SP107-201ENST00000411358 122 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 AL590639.1-201ENST00000456484 337 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 AC146507.2-201ENST00000460608 476 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 AC107918.3-201ENST00000533272 382 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SCN11AQ9UI33 AC093775.1-201ENST00000624154 1868 ntBASIC3.6□□□□□ -1.83
SCN11AQ9UI33 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SCN11AQ9UI33 AL049780.3-201ENST00000624612 1583 ntBASIC3.59□□□□□ -1.83
SCN11AQ9UI33 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SCN11AQ9UI33 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.59□□□□□ -1.83
SCN11AQ9UI33 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.59□□□□□ -1.83
SCN11AQ9UI33 RPS29P6-201ENST00000438196 145 ntBASIC3.59□□□□□ -1.83
SCN11AQ9UI33 AC010468.1-201ENST00000461022 817 ntBASIC3.59□□□□□ -1.83
SCN11AQ9UI33 RFPL1S-203ENST00000539579 330 ntBASIC3.59□□□□□ -1.83
SCN11AQ9UI33 AC027176.1-201ENST00000560204 514 ntBASIC3.59□□□□□ -1.83
SCN11AQ9UI33 RNU6-84P-201ENST00000607737 102 ntBASIC3.59□□□□□ -1.83
SCN11AQ9UI33 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SCN11AQ9UI33 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
SCN11AQ9UI33 MAPK10-362ENST00000641864 4484 ntBASIC3.59□□□□□ -1.84
SCN11AQ9UI33 SRIP2-201ENST00000428470 166 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 EXTL2P1-201ENST00000446218 416 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 PRELID3BP7-201ENST00000503606 469 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 AC018797.3-201ENST00000513388 1241 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 RNA5SP282-201ENST00000516355 108 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN11AQ9UI33 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN11AQ9UI33 AL035413.2-201ENST00000604801 525 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN11AQ9UI33 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN11AQ9UI33 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN11AQ9UI33 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN11AQ9UI33 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.58□□□□□ -1.84
SCN11AQ9UI33 TOMM20P4-201ENST00000427861 435 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN11AQ9UI33 AC017037.2-201ENST00000513850 890 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 AC245166.1-201ENST00000521012 253 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 AC009097.3-201ENST00000563557 1018 ntBASIC3.58□□□□□ -1.84
SCN11AQ9UI33 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN11AQ9UI33 ELF2P3-201ENST00000445099 1506 ntBASIC3.57□□□□□ -1.84
SCN11AQ9UI33 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN11AQ9UI33 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN11AQ9UI33 MRPL50P2-201ENST00000416821 482 ntBASIC3.57□□□□□ -1.84
SCN11AQ9UI33 AC013470.3-201ENST00000420252 1194 ntBASIC3.57□□□□□ -1.84
SCN11AQ9UI33 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN11AQ9UI33 EEF1B2P7-201ENST00000451177 676 ntBASIC3.57□□□□□ -1.84
SCN11AQ9UI33 AC243972.3-201ENST00000539655 198 ntBASIC3.57□□□□□ -1.84
SCN11AQ9UI33 AC093010.3-201ENST00000570269 15214 ntBASIC3.57□□□□□ -1.84
SCN11AQ9UI33 AC093831.2-201ENST00000624393 3427 ntBASIC3.57□□□□□ -1.84
SCN11AQ9UI33 AP006437.1-201ENST00000641440 3685 ntBASIC3.57□□□□□ -1.84
SCN11AQ9UI33 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms