Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 AL159169.3-201ENST00000608871 561 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC073114.1-201ENST00000612027 490 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.83□□□□□ -1.64
COL20A1Q9P218 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.83□□□□□ -1.64
COL20A1Q9P218 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL20A1Q9P218 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 RNU6-462P-201ENST00000362659 105 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 RN7SKP280-201ENST00000364196 304 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 Y_RNA.302-201ENST00000364997 102 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 SSXP10-201ENST00000402595 565 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 EIF4A1P3-201ENST00000411521 244 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC016907.1-201ENST00000419483 435 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 RPL30P3-201ENST00000424262 333 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 MTND1P20-201ENST00000430341 950 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AL132765.1-201ENST00000434165 553 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AL591623.2-201ENST00000449978 222 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC097493.1-201ENST00000463958 372 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AF213884.1-201ENST00000488102 463 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 ARL4AP1-201ENST00000503220 705 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC093824.1-201ENST00000508796 343 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC108064.1-201ENST00000513791 460 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC008802.1-201ENST00000519121 791 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC105233.3-201ENST00000531125 744 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC107918.3-201ENST00000533272 382 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC084757.1-201ENST00000559987 490 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 MIR4637-201ENST00000582405 84 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 WISP1-OT1-201ENST00000602893 642 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 BNIP3P11-201ENST00000603878 563 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AL451064.1-201ENST00000607718 471 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC024560.3-201ENST00000608482 349 ntBASIC4.82□□□□□ -1.64
COL20A1Q9P218 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.82□□□□□ -1.64
COL20A1Q9P218 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL20A1Q9P218 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 ZNF833P-201ENST00000424938 1494 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL20A1Q9P218 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 ELL2P4-201ENST00000446870 1376 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL20A1Q9P218 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL20A1Q9P218 AL122126.1-201ENST00000546905 1318 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL20A1Q9P218 AC011155.1-201ENST00000316512 456 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 RNU6-1243P-201ENST00000364028 107 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL20A1Q9P218 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 MT-TH-201ENST00000387441 69 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL20A1Q9P218 PPIAP31-201ENST00000405422 495 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 AC083875.1-201ENST00000419509 405 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 RPL17P36-201ENST00000420302 549 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 VN1R108P-201ENST00000431580 830 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 MTCO3P5-201ENST00000433620 714 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 HSFY6P-201ENST00000445573 403 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 RPS20P21-201ENST00000466859 343 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 AC092851.1-201ENST00000535964 478 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms