Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NANOGP6-201ENST00000429190 847 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 MRPS18BP2-201ENST00000434310 759 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 KCTD9P3-201ENST00000434597 1169 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 RPL23AP74-201ENST00000437246 471 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 HMGB1P37-201ENST00000439613 609 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 OR10R1P-201ENST00000441524 1141 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC114755.5-201ENST00000447760 831 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC133473.1-201ENST00000455173 299 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 RPL31P13-201ENST00000484151 370 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 FTH1P21-201ENST00000512179 511 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AP004371.1-201ENST00000525240 214 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC005832.3-201ENST00000537929 631 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 VN1R79P-201ENST00000593540 513 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 BNIP3P26-201ENST00000600827 554 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC103881.1-201ENST00000603476 538 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 AL157392.4-201ENST00000609756 345 ntBASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.41□□□□□ -1.7
BLOC1S4Q9NUP1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
BLOC1S4Q9NUP1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
BLOC1S4Q9NUP1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.4□□□□□ -1.7
BLOC1S4Q9NUP1 AC116096.1-201ENST00000566804 2314 ntBASIC4.4□□□□□ -1.7
BLOC1S4Q9NUP1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
BLOC1S4Q9NUP1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC007685.1-201ENST00000329806 452 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC004552.1-201ENST00000419089 348 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC012065.2-201ENST00000421295 375 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 HIGD1AP4-201ENST00000430194 280 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AL138799.3-201ENST00000438968 350 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 NPM1P49-201ENST00000448027 714 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 RPS17P13-201ENST00000448974 407 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 NUTF2P7-201ENST00000453086 375 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 RPS26P3-201ENST00000470205 348 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC011979.1-201ENST00000472300 483 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC090543.2-201ENST00000483963 348 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC004057.1-201ENST00000485827 348 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 RPS4XP15-201ENST00000489210 795 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 RNA5SP309-201ENST00000516670 106 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AP001636.2-201ENST00000525517 696 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 MTCYBP41-201ENST00000528913 1123 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 TOMM20P2-201ENST00000540082 421 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 HIGD1AP17-201ENST00000554576 276 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 MTND1P8-201ENST00000571424 950 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 BNIP3P40-201ENST00000596017 556 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC006329.2-201ENST00000611491 394 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC073530.2-201ENST00000623987 261 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC120349.2-201ENST00000625002 298 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 AC112200.1-201ENST00000625015 234 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 MTCO1P23-201ENST00000415223 1526 ntBASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.4□□□□□ -1.71
BLOC1S4Q9NUP1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BLOC1S4Q9NUP1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
BLOC1S4Q9NUP1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BLOC1S4Q9NUP1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.39□□□□□ -1.71
BLOC1S4Q9NUP1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
BLOC1S4Q9NUP1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BLOC1S4Q9NUP1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms