Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 RNU6-28P-201ENST00000362378 107 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 RNU6-335P-201ENST00000364563 113 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 RNU6-723P-201ENST00000383973 107 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 RNU1-106P-201ENST00000384382 164 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 RN7SKP267-201ENST00000410381 285 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC099677.1-201ENST00000420575 175 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC011233.1-201ENST00000422812 283 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 MTCYBP39-201ENST00000437562 491 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 SETD6P1-201ENST00000444575 317 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 TDGF1P1-201ENST00000445734 527 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC112198.1-201ENST00000505369 1220 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 GAPDHP56-201ENST00000506031 988 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC100770.1-201ENST00000532310 322 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC068587.4-201ENST00000533893 186 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC007834.2-201ENST00000536310 343 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AP006289.1-201ENST00000538089 277 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC107016.1-201ENST00000550463 337 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 PCNPP1-201ENST00000552501 511 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC007954.1-201ENST00000554198 494 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC109446.2-201ENST00000567872 497 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC006270.2-201ENST00000578523 652 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 MIR5699-201ENST00000578903 90 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC091178.1-203ENST00000584586 279 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC008759.1-201ENST00000589783 983 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC005255.1-201ENST00000593748 216 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC020910.3-201ENST00000603701 874 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC013244.1-201ENST00000604279 193 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC072039.2-201ENST00000608883 439 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 MIR7155-201ENST00000615925 56 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC078883.4-201ENST00000623218 367 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AL359715.5-201ENST00000623431 443 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC007671.2-201ENST00000637344 619 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AC008725.1-201ENST00000605123 2263 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 AL365440.1-201ENST00000436135 2167 ntBASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB16Q9NRJ7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 NCLP2-201ENST00000416078 1462 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 RNU6-433P-201ENST00000363216 104 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 RNU6-1249P-201ENST00000363237 111 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 Y_RNA.302-201ENST00000364997 102 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 MIR513A2-201ENST00000385249 127 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 RNU4-78P-201ENST00000410940 126 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AMD1P2-201ENST00000412936 992 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AL591848.1-201ENST00000413092 322 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 MTND2P18-201ENST00000419962 1030 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AC093698.1-201ENST00000423843 571 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AL732292.1-201ENST00000426692 226 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 MTND1P20-201ENST00000430341 950 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AL590103.1-201ENST00000434488 307 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 RPL7P11-201ENST00000437586 658 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 AL353691.1-201ENST00000451332 387 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 HMGB1P15-201ENST00000453854 435 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 RN7SL329P-201ENST00000467740 299 ntBASIC4.01□□□□□ -1.77
PCDHB16Q9NRJ7 RPL7P1-201ENST00000468161 747 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms