Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 SNRPEP3-201ENST00000338402 276 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 RNA5SP388-201ENST00000362584 119 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 RNY4P34-201ENST00000364779 95 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 PEX12P1-201ENST00000400284 1048 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC073264.1-201ENST00000411508 416 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AL513174.1-201ENST00000423182 629 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AL732292.1-201ENST00000426692 226 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC109583.1-201ENST00000432156 268 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC009961.2-201ENST00000435771 251 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 MTND5P14-201ENST00000441481 1267 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 SLC25A18P1-201ENST00000449385 454 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AL691482.1-201ENST00000453255 87 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 RPL23AP56-201ENST00000460778 453 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC097493.1-201ENST00000463958 372 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC022447.3-201ENST00000506865 495 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 POU5F1P7-201ENST00000508759 541 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 ENPP7P9-201ENST00000514456 627 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 SNORA70.11-201ENST00000515987 138 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 SNORA70.13-201ENST00000516116 138 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 RNU6-1153P-201ENST00000516760 105 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AL512360.1-201ENST00000555346 234 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC022916.3-201ENST00000592961 742 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AL009028.1-201ENST00000604895 802 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 AC006026.1-201ENST00000444025 1803 ntBASIC5.51□□□□□ -1.53
PDLIM7Q9NR12 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC004817.4-201ENST00000602396 3625 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC134882.1-201ENST00000603738 1676 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 OR4G11P-202ENST00000642116 1414 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 SAMMSON-213ENST00000641336 1521 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AL590240.1-201ENST00000334118 313 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 SNORA70.10-201ENST00000384515 134 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 MIR129-1-201ENST00000384972 72 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 MIR506-201ENST00000384998 124 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AL049697.2-201ENST00000403708 294 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AL356776.1-201ENST00000406574 447 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 Y_RNA.608-201ENST00000410647 95 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 RNU6-195P-201ENST00000411352 109 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 RSU1P3-201ENST00000412878 835 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 FCF1P1-201ENST00000432690 571 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 LSM1P1-201ENST00000438629 273 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 ACTR3P2-201ENST00000439585 1257 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC093019.1-201ENST00000443135 252 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC091180.1-201ENST00000462104 372 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC021660.1-201ENST00000465006 554 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC017015.1-201ENST00000477387 286 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 KCTD9P5-201ENST00000504141 1170 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 ENPP7P11-201ENST00000505915 627 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC025674.1-201ENST00000507074 324 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC093809.1-201ENST00000509155 340 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC025678.1-201ENST00000567861 338 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 MIR544B-201ENST00000582372 78 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC005261.5-201ENST00000596280 355 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AL133338.2-201ENST00000604292 736 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC007363.1-201ENST00000604736 620 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AP001521.1-201ENST00000609150 300 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms