Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC097714.1-201ENST00000511272 1647 ntBASIC4.15□□□□□ -1.74
BRF2Q9HAW0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 RNU1-94P-201ENST00000362627 173 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 RNU6-263P-201ENST00000363811 107 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 RNA5SP175-201ENST00000364275 119 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 SNORD66.1-201ENST00000391230 76 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC097374.1-203ENST00000400783 485 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 RPS16P5-201ENST00000406501 404 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 TMSB10P2-201ENST00000416049 131 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 MTCYBP38-201ENST00000417160 1123 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 GLRXP1-201ENST00000423261 334 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 MTND4P20-201ENST00000424125 869 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AL732292.1-201ENST00000426692 226 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 ART2BP-201ENST00000453501 499 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 snoU109.4-201ENST00000458953 143 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 RPL21P126-201ENST00000470049 478 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC147055.4-201ENST00000504399 745 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 MRPS33P3-201ENST00000513456 322 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC118465.1-201ENST00000513820 1271 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 RNU6-1129P-201ENST00000515964 104 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 OR5M7P-201ENST00000526140 972 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 DEFB131D-201ENST00000526803 184 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AL109766.1-201ENST00000555080 552 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC008015.1-201ENST00000555505 465 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC053481.3-201ENST00000577881 843 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC106791.2-201ENST00000604680 391 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AL031666.3-201ENST00000609320 1006 ntBASIC4.15□□□□□ -1.75
BRF2Q9HAW0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
BRF2Q9HAW0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 MTND4P34-201ENST00000572715 1371 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC010300.1-201ENST00000600671 5134 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC097504.1-201ENST00000515103 2415 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC027287.1-201ENST00000553115 1453 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 RPL23AP57-201ENST00000332361 466 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 RNU6-1200P-201ENST00000384162 107 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AL603766.1-201ENST00000407763 664 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 P2RY10P2-201ENST00000416730 913 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AL161631.1-201ENST00000417933 486 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AL953862.1-201ENST00000423016 168 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 FAR2P4-202ENST00000425399 584 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 RPEP3-201ENST00000425462 676 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 RPL23AP1-201ENST00000428990 471 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC011998.1-201ENST00000433403 117 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 BMS1P19-201ENST00000433925 393 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 HLA-N-201ENST00000437516 135 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AL512326.1-201ENST00000443050 721 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AL133217.1-201ENST00000450980 425 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AL121877.1-201ENST00000453704 622 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AP000563.1-201ENST00000490865 758 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC104164.2-201ENST00000496953 495 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 TMEM251P1-201ENST00000503717 318 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 VWA8P1-201ENST00000510889 176 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 RNU6-150P-201ENST00000516237 95 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC239860.2-201ENST00000525886 270 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC006064.5-201ENST00000541782 248 ntBASIC4.14□□□□□ -1.75
BRF2Q9HAW0 AC069240.1-201ENST00000548774 375 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms