Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC022447.3-201ENST00000506865 495 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC108064.1-201ENST00000513791 460 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 Y_RNA.719-201ENST00000517156 106 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 BRD9P1-201ENST00000529855 560 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 ZNF705CP-201ENST00000530515 889 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC008127.2-201ENST00000549925 1075 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 UBE2FP2-201ENST00000566646 462 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 MIR3913-1-201ENST00000577744 102 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 RN7SL176P-201ENST00000580352 264 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC022916.3-201ENST00000592961 742 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC233280.2-201ENST00000603917 1070 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC067959.1-201ENST00000604334 379 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC112191.3-201ENST00000604371 277 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AP000860.1-201ENST00000605250 559 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AP001596.2-201ENST00000608410 312 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 MIR378J-201ENST00000611988 109 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC091304.9-201ENST00000612091 226 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC090970.3-201ENST00000612566 866 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC123768.4-201ENST00000616244 701 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC138649.3-201ENST00000622154 254 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 AC244258.1-201ENST00000637553 1071 ntBASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
AMBRA1Q9C0C7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 OR11H5P-202ENST00000641612 1325 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 Y_RNA.554-201ENST00000384672 102 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RPL17P50-201ENST00000396131 546 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 ARF4P3-201ENST00000397387 509 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AL357515.1-201ENST00000402967 542 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RPS3AP3-201ENST00000411933 242 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 TPMTP2-201ENST00000414372 726 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RPL26P29-201ENST00000415623 438 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AL513174.1-201ENST00000423182 629 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AL031736.2-201ENST00000426573 787 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 NPM1P34-201ENST00000428821 893 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 PGBD4P3-201ENST00000440731 581 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RPS26P56-201ENST00000444468 240 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RPL7P36-201ENST00000444633 681 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC000111.2-201ENST00000448200 210 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AL591623.2-201ENST00000449978 222 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC003071.1-201ENST00000451219 789 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC027673.1-201ENST00000456245 405 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC026410.2-201ENST00000460281 156 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC090142.1-201ENST00000465776 462 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RPL7P22-201ENST00000466005 733 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RPL31P50-201ENST00000471002 296 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC068587.1-201ENST00000483613 781 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC108941.1-201ENST00000502853 530 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC018797.3-201ENST00000513388 1241 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RN7SKP260-201ENST00000516907 149 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 HMGB1P19-201ENST00000517578 577 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 HSPA8P13-201ENST00000523715 472 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms