Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL365400.2-201ENST00000605604 902 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 AP004607.9-201ENST00000618202 316 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 MIR7153-201ENST00000637758 57 ntBASIC4.38□□□□□ -1.71
SCAPERQ9BY12 ASNSP3-201ENST00000451989 1306 ntBASIC4.37□□□□□ -1.71
SCAPERQ9BY12 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SCAPERQ9BY12 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCAPERQ9BY12 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.37□□□□□ -1.71
SCAPERQ9BY12 ELF2P3-201ENST00000445099 1506 ntBASIC4.37□□□□□ -1.71
SCAPERQ9BY12 SKINT1L-201ENST00000401057 817 ntBASIC4.37□□□□□ -1.71
SCAPERQ9BY12 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.37□□□□□ -1.71
SCAPERQ9BY12 FDX1P2-201ENST00000450769 375 ntBASIC4.37□□□□□ -1.71
SCAPERQ9BY12 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.37□□□□□ -1.71
SCAPERQ9BY12 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.37□□□□□ -1.71
SCAPERQ9BY12 AP001207.2-201ENST00000519490 539 ntBASIC4.37□□□□□ -1.71
SCAPERQ9BY12 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.37□□□□□ -1.71
SCAPERQ9BY12 RN7SL371P-201ENST00000578099 267 ntBASIC4.37□□□□□ -1.71
SCAPERQ9BY12 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.37□□□□□ -1.71
SCAPERQ9BY12 AC021755.1-201ENST00000559747 1447 ntBASIC4.36□□□□□ -1.71
SCAPERQ9BY12 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.36□□□□□ -1.71
SCAPERQ9BY12 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SCAPERQ9BY12 RNU1-112P-201ENST00000364401 164 ntBASIC4.36□□□□□ -1.71
SCAPERQ9BY12 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.36□□□□□ -1.71
SCAPERQ9BY12 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.36□□□□□ -1.71
SCAPERQ9BY12 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.36□□□□□ -1.71
SCAPERQ9BY12 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.36□□□□□ -1.71
SCAPERQ9BY12 AP001025.2-201ENST00000490908 477 ntBASIC4.36□□□□□ -1.71
SCAPERQ9BY12 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.36□□□□□ -1.71
SCAPERQ9BY12 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.36□□□□□ -1.71
SCAPERQ9BY12 AL592494.2-201ENST00000425455 1548 ntBASIC4.35□□□□□ -1.71
SCAPERQ9BY12 AC116096.1-201ENST00000566804 2314 ntBASIC4.35□□□□□ -1.71
SCAPERQ9BY12 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SCAPERQ9BY12 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCAPERQ9BY12 RNU6-805P-201ENST00000365643 106 ntBASIC4.35□□□□□ -1.71
SCAPERQ9BY12 NECAP1P2-201ENST00000455668 727 ntBASIC4.35□□□□□ -1.71
SCAPERQ9BY12 UBL5P3-201ENST00000475112 231 ntBASIC4.35□□□□□ -1.71
SCAPERQ9BY12 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.35□□□□□ -1.71
SCAPERQ9BY12 AC008549.1-201ENST00000512900 643 ntBASIC4.35□□□□□ -1.71
SCAPERQ9BY12 SNORA70.14-201ENST00000516205 110 ntBASIC4.35□□□□□ -1.71
SCAPERQ9BY12 AC104027.1-201ENST00000521887 300 ntBASIC4.35□□□□□ -1.71
SCAPERQ9BY12 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCAPERQ9BY12 AC079089.3-201ENST00000603094 673 ntBASIC4.35□□□□□ -1.71
SCAPERQ9BY12 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SCAPERQ9BY12 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SCAPERQ9BY12 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCAPERQ9BY12 AC107027.3-201ENST00000565095 3473 ntBASIC4.34□□□□□ -1.71
SCAPERQ9BY12 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.34□□□□□ -1.71
SCAPERQ9BY12 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 AC108078.3-201ENST00000502633 489 ntBASIC4.34□□□□□ -1.71
SCAPERQ9BY12 AC008413.1-201ENST00000511864 177 ntBASIC4.34□□□□□ -1.71
SCAPERQ9BY12 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 MIR4769-201ENST00000584126 77 ntBASIC4.34□□□□□ -1.71
SCAPERQ9BY12 MIR7843-201ENST00000622274 79 ntBASIC4.34□□□□□ -1.71
SCAPERQ9BY12 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.34□□□□□ -1.71
SCAPERQ9BY12 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SCAPERQ9BY12 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SCAPERQ9BY12 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.33□□□□□ -1.72
SCAPERQ9BY12 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCAPERQ9BY12 RPL29P29-201ENST00000448725 423 ntBASIC4.33□□□□□ -1.72
SCAPERQ9BY12 TXNP6-201ENST00000510190 310 ntBASIC4.33□□□□□ -1.72
SCAPERQ9BY12 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
SCAPERQ9BY12 AL358913.1-201ENST00000554342 121 ntBASIC4.33□□□□□ -1.72
SCAPERQ9BY12 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.33□□□□□ -1.72
SCAPERQ9BY12 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.33□□□□□ -1.72
SCAPERQ9BY12 MIR3186-201ENST00000577404 85 ntBASIC4.33□□□□□ -1.72
SCAPERQ9BY12 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.33□□□□□ -1.72
SCAPERQ9BY12 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.33□□□□□ -1.72
SCAPERQ9BY12 AC022509.4-201ENST00000621404 572 ntBASIC4.33□□□□□ -1.72
SCAPERQ9BY12 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.33□□□□□ -1.72
SCAPERQ9BY12 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 AL138827.1-201ENST00000402666 306 ntBASIC4.32□□□□□ -1.72
SCAPERQ9BY12 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 RPS20P32-201ENST00000456044 356 ntBASIC4.32□□□□□ -1.72
SCAPERQ9BY12 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 AC006445.2-201ENST00000510061 472 ntBASIC4.32□□□□□ -1.72
SCAPERQ9BY12 RNA5SP24-201ENST00000516478 95 ntBASIC4.32□□□□□ -1.72
SCAPERQ9BY12 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 MIR6817-201ENST00000615588 66 ntBASIC4.32□□□□□ -1.72
SCAPERQ9BY12 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.32□□□□□ -1.72
SCAPERQ9BY12 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SCAPERQ9BY12 RNA5SP21-201ENST00000410917 96 ntBASIC4.31□□□□□ -1.72
SCAPERQ9BY12 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.31□□□□□ -1.72
SCAPERQ9BY12 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.31□□□□□ -1.72
SCAPERQ9BY12 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.31□□□□□ -1.72
SCAPERQ9BY12 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.31□□□□□ -1.72
SCAPERQ9BY12 RPL21P71-201ENST00000465598 459 ntBASIC4.31□□□□□ -1.72
SCAPERQ9BY12 RPS17P11-201ENST00000474297 293 ntBASIC4.31□□□□□ -1.72
SCAPERQ9BY12 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms