Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC006484.1-201ENST00000435086 1884 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL049780.3-201ENST00000624612 1583 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RPL23AP57-201ENST00000332361 466 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 Y_RNA.197-201ENST00000364004 102 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 Y_RNA.231-201ENST00000364358 102 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RNU1-136P-201ENST00000384181 164 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RNU6-831P-201ENST00000384548 107 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RNY4P36-201ENST00000391116 96 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RNU4-26P-201ENST00000410270 107 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 Y_RNA.618-201ENST00000410949 107 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RN7SKP279-201ENST00000411383 298 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL354766.1-201ENST00000423396 542 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RPS24P8-201ENST00000431490 402 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RPL23AP30-201ENST00000432419 501 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 ERLEC1P1-201ENST00000433806 578 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 OR6D1P-201ENST00000436165 939 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC019185.1-201ENST00000442718 389 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 DDX3P2-201ENST00000446138 111 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC079781.2-201ENST00000446424 169 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC091685.2-201ENST00000454924 864 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RPS20P32-201ENST00000456044 356 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL356010.1-201ENST00000456364 102 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RPL31P50-201ENST00000471002 296 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC104563.1-201ENST00000476147 376 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 OR2AO1P-201ENST00000476497 403 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL163973.1-201ENST00000484753 577 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RN7SL184P-201ENST00000488308 297 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RN7SL547P-201ENST00000490793 290 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AP001025.2-201ENST00000490908 477 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 TMEM251P1-201ENST00000503717 318 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 IGKV2-36-201ENST00000519999 223 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC022616.3-201ENST00000523940 148 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL389895.1-201ENST00000554127 252 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL117187.1-201ENST00000555482 181 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 MAGOH2P-202ENST00000584384 429 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 BBIP1P1-201ENST00000602999 279 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 uc_338.15-201ENST00000615470 191 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL356274.1-201ENST00000617064 410 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC079597.1-201ENST00000624306 508 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 AL133216.2-202ENST00000634512 349 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSBP3Q9BWW4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 AL121886.1-201ENST00000358609 435 ntBASIC4.61□□□□□ -1.67
SSBP3Q9BWW4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms