Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL450263.2-201ENST00000439400 589 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.31□□□□□ -1.56
PTPN18Q99952 RPS27AP15-201ENST00000447672 466 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPN18Q99952 Z99127.3-201ENST00000448158 395 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN18Q99952 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPN18Q99952 SNRPFP4-201ENST00000456366 242 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 AC013267.1-201ENST00000458227 267 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPN18Q99952 AC090013.1-201ENST00000485147 480 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 AC091951.2-201ENST00000500762 203 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 STMN1P2-201ENST00000508435 439 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPN18Q99952 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPN18Q99952 AC025465.4-201ENST00000513422 638 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 RNU6-885P-201ENST00000516607 104 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 RNA5SP143-201ENST00000516936 115 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 RNA5SP135-201ENST00000517019 125 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 HIGD1AP6-201ENST00000521833 279 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN18Q99952 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN18Q99952 AC090616.5-202ENST00000582111 297 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 BNIP3P9-201ENST00000603714 553 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 SEPT7P9-203ENST00000604116 343 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 AC090578.1-201ENST00000604955 591 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN18Q99952 AC073348.1-201ENST00000623002 331 ntBASIC5.31□□□□□ -1.56
PTPN18Q99952 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.31□□□□□ -1.56
PTPN18Q99952 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.31□□□□□ -1.56
PTPN18Q99952 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PTPN18Q99952 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PTPN18Q99952 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PTPN18Q99952 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN18Q99952 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
PTPN18Q99952 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN18Q99952 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN18Q99952 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPN18Q99952 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN18Q99952 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN18Q99952 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.3□□□□□ -1.56
PTPN18Q99952 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN18Q99952 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PTPN18Q99952 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN18Q99952 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AL512646.1-201ENST00000269395 1077 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 Y_RNA.453-201ENST00000384223 109 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 MT-TL1-201ENST00000386347 75 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 RNU6-1009P-201ENST00000390996 107 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 RPL23AP47-201ENST00000408017 460 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 AC009237.5-201ENST00000414271 501 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN18Q99952 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC092013.1-201ENST00000438795 332 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.3□□□□□ -1.56
PTPN18Q99952 GDI2P2-201ENST00000445131 608 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 RPL23AP15-201ENST00000450202 459 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 NDUFA5P7-201ENST00000452914 242 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN18Q99952 MTND5P5-201ENST00000503764 376 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 PARP4P3-201ENST00000510265 317 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 MTND3P22-201ENST00000510932 243 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AF279873.1-201ENST00000523393 313 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 AP005639.2-201ENST00000527592 928 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 AP002453.2-201ENST00000533503 320 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.3□□□□□ -1.56
PTPN18Q99952 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.3□□□□□ -1.56
PTPN18Q99952 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN18Q99952 AL031658.2-201ENST00000616850 651 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 AC018816.2-201ENST00000621460 353 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 AC112204.3-201ENST00000623822 332 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 AP003122.6-201ENST00000623831 495 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 FER-210ENST00000628534 558 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN18Q99952 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC097461.1-201ENST00000568928 2821 ntBASIC5.3□□□□□ -1.56
PTPN18Q99952 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.3□□□□□ -1.56
PTPN18Q99952 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN18Q99952 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTPN18Q99952 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
PTPN18Q99952 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN18Q99952 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.3□□□□□ -1.56
PTPN18Q99952 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.29□□□□□ -1.56
PTPN18Q99952 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN18Q99952 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
PTPN18Q99952 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN18Q99952 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTPN18Q99952 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.29□□□□□ -1.56
PTPN18Q99952 Y_RNA.372-201ENST00000365599 102 ntBASIC5.29□□□□□ -1.56
PTPN18Q99952 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms