Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC092647.1-201ENST00000420654 287 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 RPL21P91-201ENST00000429231 479 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 RPS27AP12-201ENST00000429552 465 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 UBE2FP3-201ENST00000436366 524 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 IFNWP4-201ENST00000453148 294 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.11□□□□□ -1.59
NUP88Q99567 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.11□□□□□ -1.59
NUP88Q99567 AC026410.2-201ENST00000460281 156 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 PLGLA-201ENST00000465668 449 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 RPL7P19-201ENST00000469948 618 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 AL136126.1-201ENST00000473603 402 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP88Q99567 RPS4XP15-201ENST00000489210 795 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.11□□□□□ -1.59
NUP88Q99567 MTND5P4-201ENST00000514978 288 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 RNA5SP446-201ENST00000515955 82 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 SNORD116-26-201ENST00000516006 96 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 RNA5SP497-201ENST00000516081 97 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.11□□□□□ -1.59
NUP88Q99567 AC092470.1-201ENST00000546187 132 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.11□□□□□ -1.59
NUP88Q99567 MIR3160-1-201ENST00000577972 85 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 AC091178.1-203ENST00000584586 279 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.11□□□□□ -1.59
NUP88Q99567 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.11□□□□□ -1.59
NUP88Q99567 AL031985.2-201ENST00000600955 480 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 U73023.1-201ENST00000603134 700 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 YWHAQP7-201ENST00000603536 658 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 AL160290.3-201ENST00000604869 165 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NUP88Q99567 AC021755.1-201ENST00000559747 1447 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NUP88Q99567 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP88Q99567 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP88Q99567 AC011978.2-201ENST00000569835 2054 ntBASIC5.11□□□□□ -1.59
NUP88Q99567 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.11□□□□□ -1.59
NUP88Q99567 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP88Q99567 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 SNORA70C-201ENST00000384538 135 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 RNA5SP372-201ENST00000390836 115 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
NUP88Q99567 AC097374.1-203ENST00000400783 485 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 TPMTP3-201ENST00000411928 735 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 NPM1P11-201ENST00000417106 855 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP88Q99567 AC004448.2-201ENST00000422360 586 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AL035410.1-201ENST00000427409 427 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP88Q99567 RPEP2-201ENST00000432149 701 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP88Q99567 MTCO2P16-201ENST00000436962 677 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 THAP5P1-201ENST00000439089 262 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP88Q99567 EEF1E1P1-201ENST00000446998 430 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 AC104073.1-201ENST00000451988 151 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 BX276092.4-201ENST00000452056 248 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 AC073387.1-201ENST00000453261 709 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP88Q99567 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP88Q99567 MTND4LP3-201ENST00000468320 276 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC090013.1-201ENST00000485147 480 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC068724.1-201ENST00000487100 792 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC080014.1-201ENST00000496877 1201 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 HMGB1P21-201ENST00000502313 581 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 TMEM251P1-201ENST00000503717 318 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP88Q99567 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP88Q99567 AC112198.1-201ENST00000505369 1220 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP88Q99567 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP88Q99567 PARP4P3-201ENST00000510265 317 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.1□□□□□ -1.59
NUP88Q99567 AC016065.2-201ENST00000514530 444 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 RN7SKP277-201ENST00000516895 283 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AP003730.1-201ENST00000524605 285 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP88Q99567 OR5BC1P-201ENST00000529327 739 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 OR4A45P-201ENST00000529954 901 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC023161.2-201ENST00000551218 780 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP88Q99567 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP88Q99567 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP88Q99567 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP88Q99567 AC007224.1-201ENST00000564410 144 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 ROCK1P1-201ENST00000573767 549 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC011260.1-201ENST00000578420 472 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AP005136.1-201ENST00000579765 429 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.1□□□□□ -1.59
NUP88Q99567 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP88Q99567 AC007566.2-201ENST00000603642 413 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC025588.3-201ENST00000604182 274 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AL009028.1-201ENST00000604895 802 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP88Q99567 AC092140.2-201ENST00000618027 521 ntBASIC5.1□□□□□ -1.59
NUP88Q99567 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms