Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 CR381670.1-201ENST00000624291 1693 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC011978.2-201ENST00000569835 2054 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 RNA5SP171-201ENST00000391071 115 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AC245052.5-201ENST00000416320 649 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AIMP1P1-201ENST00000418670 937 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 PSMA2P3-201ENST00000429685 675 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AL513175.1-201ENST00000431492 780 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 SLC25A15P5-201ENST00000508033 253 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 OR5AP1P-201ENST00000529730 940 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 ATP5F1P7-201ENST00000567330 760 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AC106734.1-201ENST00000568646 663 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 RMST_10.1-201ENST00000616309 154 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 MFSD8-213ENST00000641134 1327 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 AC107081.3-201ENST00000612715 2034 ntBASIC3.63□□□□□ -1.83
RPRD1AQ96P16 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPRD1AQ96P16 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 RNA5SP119-201ENST00000362715 117 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 RNU6-792P-201ENST00000363490 107 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 RNU6-283P-201ENST00000364788 107 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AL391417.1-201ENST00000404100 426 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 SNORA11C-201ENST00000408532 129 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 BX842559.1-201ENST00000419615 532 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AC093422.3-201ENST00000428506 305 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 YME1L1P1-201ENST00000429435 297 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 MTND1P33-201ENST00000446251 917 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AL358232.1-201ENST00000448030 501 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 RN7SL594P-201ENST00000470590 287 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AC084357.1-201ENST00000473404 255 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AC025518.1-201ENST00000479856 347 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 DUXAP2-201ENST00000519198 589 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AF279873.1-201ENST00000523393 313 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 HMGN2P28-201ENST00000606102 262 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AL118556.2-201ENST00000614375 824 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AC092184.1-201ENST00000625042 715 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AL356118.1-201ENST00000635272 1078 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.62□□□□□ -1.83
RPRD1AQ96P16 AL021368.2-201ENST00000606125 5352 ntBASIC3.62□□□□□ -1.83
RPRD1AQ96P16 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 SNORA7.2-201ENST00000364446 145 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 RNA5SP235-201ENST00000365411 114 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RPRD1AQ96P16 SNORA51.12-201ENST00000384448 134 ntBASIC3.61□□□□□ -1.83
RPRD1AQ96P16 MIR7-3-201ENST00000384898 110 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms