Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC004925.1-201ENST00000624256 2706 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 RNU6-251P-201ENST00000363235 104 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 MIR199A2-201ENST00000385289 110 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 RPS26P8-201ENST00000393490 348 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL603865.2-201ENST00000401679 213 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL022722.2-201ENST00000402519 180 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC016769.2-201ENST00000414815 475 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL035410.1-201ENST00000427409 427 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC006548.1-201ENST00000427470 102 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 HMGB3P5-201ENST00000428894 612 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 MTATP6P17-201ENST00000431030 672 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 TBCAP1-201ENST00000436520 327 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 HMGB1P12-201ENST00000438594 598 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 MTCO1P53-201ENST00000441633 699 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 RPS17P13-201ENST00000448974 407 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC244505.3-201ENST00000454598 187 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 CEACAMP4-201ENST00000457676 421 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 VN1R17P-201ENST00000472048 1090 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 RPS4XP13-201ENST00000483219 789 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 DYNLL1P6-201ENST00000503440 264 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 SNORA70.14-201ENST00000516205 110 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 SNORA31.9-201ENST00000516429 84 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 RNA5SP179-201ENST00000517284 121 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 MTATP6P24-201ENST00000576835 677 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC069366.1-201ENST00000583159 838 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AL160237.3-201ENST00000604114 1013 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC091167.4-201ENST00000605079 184 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC090425.2-201ENST00000608818 501 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 MIR486-1-201ENST00000612171 68 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 CR381572.1-201ENST00000625098 102 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC026634.1-201ENST00000634369 198 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AC087821.2-201ENST00000637086 450 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 AF127577.6-201ENST00000623352 2191 ntBASIC3.85□□□□□ -1.79
PDLIM5Q96HC4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 ANKRD36P1-201ENST00000344424 659 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 SNORA70C-201ENST00000384538 135 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 HLFP1-201ENST00000402375 499 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 ZNF602P-201ENST00000405929 924 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 RN7SKP56-201ENST00000410513 331 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 BTF3P8-201ENST00000414577 526 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AIMP1P1-201ENST00000418670 937 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 USP9YP21-201ENST00000420603 432 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AC092634.2-201ENST00000428146 1010 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 NPM1P13-201ENST00000452663 865 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 MRPL42P4-201ENST00000453267 443 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 RPL21P11-201ENST00000461458 483 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 RPS23P7-201ENST00000466210 444 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 RPL7P19-201ENST00000469948 618 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AC106872.2-201ENST00000494303 480 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 KLRA1P-201ENST00000503499 986 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AC114322.1-201ENST00000506771 926 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.84□□□□□ -1.79
PDLIM5Q96HC4 RN7SKP122-201ENST00000515923 296 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms