Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 ZNF519P3-201ENST00000557158 1032 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AP000403.1-201ENST00000603349 851 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AL589743.7-201ENST00000612637 233 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 U6atac.1-201ENST00000616025 117 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC116165.2-201ENST00000616705 206 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ATG4AQ8WYN0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.59□□□□□ -1.68
ATG4AQ8WYN0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 MIR1911-201ENST00000410783 80 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 CYCSP10-201ENST00000417973 294 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC099336.2-201ENST00000422457 254 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 IPMKP1-201ENST00000425988 855 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AL031736.2-201ENST00000426573 787 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 CEACAMP6-201ENST00000452007 574 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 SNRPFP4-201ENST00000456366 242 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 MTCO3P2-201ENST00000457365 171 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC099560.2-201ENST00000457554 255 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 OR9M1P-201ENST00000459641 921 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC021678.1-201ENST00000505195 936 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC093809.1-201ENST00000509155 340 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 MTND5P4-201ENST00000514978 288 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 FABP5P5-201ENST00000515537 406 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC025881.1-201ENST00000518851 512 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AP000676.2-201ENST00000529711 301 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 BRD9P1-201ENST00000529855 560 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AP001781.1-201ENST00000530977 207 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AP002453.2-201ENST00000533503 320 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC016957.1-201ENST00000534895 309 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 MIR4637-201ENST00000582405 84 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC015871.2-201ENST00000603605 948 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 BNIP3P11-201ENST00000603878 563 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC068944.2-201ENST00000610373 403 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AC138749.5-201ENST00000611461 208 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 MIR7155-201ENST00000615925 56 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 MIR6891-201ENST00000618788 93 ntBASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ATG4AQ8WYN0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC104118.1-201ENST00000607625 1589 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 RNU1-15P-201ENST00000353977 144 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 RNU1-108P-201ENST00000362556 161 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 Y_RNA.97-201ENST00000363094 102 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 RNU1-85P-201ENST00000364127 164 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AL121972.1-201ENST00000402023 252 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 HMGB1P17-201ENST00000403495 628 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC091862.1-201ENST00000438016 1100 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms