Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 Y_RNA.263-201ENST00000364659 114 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 RNA5SP90-201ENST00000364801 99 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 RNA5SP223-201ENST00000365174 120 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC068050.1-201ENST00000394891 380 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 RPL31P1-201ENST00000398116 372 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AL645733.1-201ENST00000402250 217 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AL049693.1-201ENST00000402760 611 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 GSTM3P2-201ENST00000412746 530 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC019097.1-201ENST00000424783 735 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC093019.1-201ENST00000443135 252 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AL118496.2-201ENST00000448300 230 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 NIFKP7-201ENST00000503365 834 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 MTCO2P30-201ENST00000503662 364 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AP003034.1-201ENST00000534621 422 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC009117.1-201ENST00000563948 554 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC099489.2-201ENST00000574976 260 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 RN7SL708P-201ENST00000580952 299 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 MIR4433B-201ENST00000581329 102 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 NRBF2P5-201ENST00000603087 788 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 BNIP3P10-201ENST00000605360 577 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AL445222.1-201ENST00000607259 628 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC023813.4-201ENST00000607580 580 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AL391813.2-201ENST00000609113 322 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 Z95327.3-201ENST00000610385 572 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 EIF3FP1-201ENST00000613970 806 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC068870.2-201ENST00000620635 389 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC000123.2-201ENST00000623124 461 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AP002799.1-201ENST00000623552 423 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 AC112487.2-201ENST00000637950 304 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 THAP12P5-201ENST00000405864 2275 ntBASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
TRIM48Q8IWZ4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC006026.1-201ENST00000444025 1803 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC023421.1-201ENST00000590535 1785 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 RNA5SP391-201ENST00000363456 119 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-730P-201ENST00000383954 104 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 Y_RNA.509-201ENST00000384506 99 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 Y_RNA.535-201ENST00000384612 99 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 MT-TD-201ENST00000387419 68 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 snosnR66.1-201ENST00000391095 99 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 RPL23AP32-201ENST00000395315 459 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-908P-201ENST00000410160 94 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 USP9YP15-201ENST00000442391 422 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC104563.1-201ENST00000476147 376 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 RPS4XP18-201ENST00000495480 763 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC006427.1-201ENST00000514359 712 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-1153P-201ENST00000516760 105 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-201P-201ENST00000517100 61 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 OR8L1P-201ENST00000534005 955 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms