Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 UBE2NP1-201ENST00000545592 458 ntBASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 MIR4444-1-201ENST00000581696 74 ntBASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 MIR4444-2-201ENST00000584390 74 ntBASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 MTCO3P22-201ENST00000603219 784 ntBASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 AC100814.1-201ENST00000606963 623 ntBASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 AC012442.3-202ENST00000636742 206 ntBASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDKL3Q8IVW4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 RNA5SP171-201ENST00000391071 115 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 PTMAP2-201ENST00000397627 327 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 DNAJC19P6-201ENST00000401853 280 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC234782.4-201ENST00000417646 1048 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 BX890604.2-201ENST00000427883 474 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 RPL21P110-201ENST00000433345 446 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 TXNP1-201ENST00000441872 371 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 RPL26P28-201ENST00000451325 435 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 ARPC3P2-201ENST00000457786 533 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC034236.1-201ENST00000469891 373 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 RPL23AP44-201ENST00000482216 473 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC104687.1-201ENST00000485829 412 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 OR8I1P-201ENST00000529291 931 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 OR4T1P-201ENST00000554933 911 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AL121594.4-201ENST00000556211 1196 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AL845331.3-202ENST00000562856 261 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC011816.2-201ENST00000607089 556 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 AC006023.2-201ENST00000609916 167 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 MIR4496-201ENST00000635896 61 ntBASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDKL3Q8IVW4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 OR5T3-201ENST00000303059 1023 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 RPL7P26-201ENST00000333817 754 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 RNU1-70P-201ENST00000362618 164 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 RNA5SP391-201ENST00000363456 119 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 SNORD56.3-201ENST00000363507 71 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 SNORA73.2-201ENST00000364946 201 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 RNU6-805P-201ENST00000365643 106 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 EIF5P1-201ENST00000400019 1231 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 RNA5SP44-201ENST00000410446 133 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 RNA5SP229-201ENST00000410809 99 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AL451062.2-201ENST00000427515 271 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 VN1R34P-201ENST00000447387 883 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC115115.1-201ENST00000449927 248 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 PLGLA-201ENST00000465668 449 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC093663.1-201ENST00000497190 394 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 HMGB1P46-201ENST00000520062 610 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 MIR4474-201ENST00000579189 78 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC090616.5-202ENST00000582111 297 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 MIR4276-201ENST00000584832 70 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 KATNBL1P1-201ENST00000605192 748 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC016877.3-201ENST00000606778 504 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 U3.45-201ENST00000607547 219 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AC024023.1-201ENST00000624530 922 ntBASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms