Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC105031.1-201ENST00000518550 476 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 MAGOH2P-202ENST00000584384 429 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 BNIP3P16-201ENST00000589779 534 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC006157.1-201ENST00000611750 366 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC107871.2-201ENST00000612894 502 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC090607.5-201ENST00000615692 224 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC127024.6-201ENST00000621598 424 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 SNORA17.5-201ENST00000630429 132 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC114774.1-201ENST00000507410 1770 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC092125.1-201ENST00000562568 1995 ntBASIC5.18□□□□□ -1.58
ATG4DQ86TL0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4DQ86TL0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 MTND5P30-201ENST00000452896 1731 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AC093909.5-201ENST00000621839 1799 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 RNA5SP242-201ENST00000364171 118 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 RNU6-1040P-201ENST00000383974 107 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 Y_RNA.447-201ENST00000384184 113 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 Y_RNA.530-201ENST00000384587 101 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 RNU6-310P-201ENST00000384655 107 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 Y_RNA.552-201ENST00000384665 112 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 SSXP10-201ENST00000402595 565 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AC080125.1-201ENST00000414888 684 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AC093151.1-201ENST00000427711 313 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 SNORD125-201ENST00000459538 96 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 RPL31P50-201ENST00000471002 296 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 Y_RNA.661-201ENST00000516003 99 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 RNU6-1038P-201ENST00000516516 104 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 RNU6-566P-201ENST00000516790 107 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AP000827.1-201ENST00000527814 258 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AL137100.2-201ENST00000555786 315 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AC113195.1-201ENST00000579952 141 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AL022099.1-201ENST00000604551 712 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 ATP1B3P1-201ENST00000605365 821 ntBASIC5.17□□□□□ -1.58
ATG4DQ86TL0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ATG4DQ86TL0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4DQ86TL0 SNORA51.1-201ENST00000363243 140 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RNU6-853P-201ENST00000364306 107 ntBASIC5.16□□□□□ -1.58
ATG4DQ86TL0 RN7SKP186-201ENST00000365371 303 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms