Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 MIR1282-201ENST00000408865 101 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 RPL34P3-201ENST00000421454 338 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AL358176.2-201ENST00000425769 204 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AL596266.1-201ENST00000448132 400 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC107399.1-201ENST00000451226 265 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC104073.1-201ENST00000451988 151 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AP001992.1-205ENST00000462248 379 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 RPS17P5-201ENST00000498293 408 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC093767.1-201ENST00000504523 156 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC004062.1-201ENST00000509926 645 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 RNU6-615P-201ENST00000516065 106 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AP005435.4-201ENST00000529514 284 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 SNRPGP18-201ENST00000553000 214 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 MIR4675-201ENST00000577898 77 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 MIR4311-201ENST00000580794 100 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 APOOP1-201ENST00000604695 592 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AL592436.1-201ENST00000605135 558 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AL713922.2-201ENST00000619384 716 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 MTCO1P7-201ENST00000419523 1542 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 NXPH1-205ENST00000602349 1953 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 AL034546.1-201ENST00000623740 3693 ntBASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.36□□□□□ -1.55
UBE3DQ7Z6J8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 RNU5E-8P-201ENST00000363502 116 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 RNU6-196P-201ENST00000384315 107 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 RNU6-903P-201ENST00000391270 109 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 RNF10P1-201ENST00000418589 369 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 RPS3AP52-201ENST00000435639 297 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 MTND1P9-201ENST00000453775 944 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 SNORD125-201ENST00000459538 96 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 RN7SL284P-201ENST00000498823 275 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 RPL39P5-202ENST00000512505 151 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 RN7SKP99-201ENST00000517028 307 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 SNORA43.3-201ENST00000517240 103 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 CYCSP22-201ENST00000517555 339 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 TRIM51DP-201ENST00000529746 596 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AC079600.1-201ENST00000550326 297 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AP001486.3-201ENST00000615334 372 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 MTND4LP32-201ENST00000636111 270 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AC079776.5-201ENST00000641920 211 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 AC025470.1-201ENST00000510053 2032 ntBASIC5.35□□□□□ -1.55
UBE3DQ7Z6J8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC104964.3-201ENST00000606115 2860 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AC018809.2-201ENST00000602436 3823 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 SNORA22B-201ENST00000383876 138 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 RNU6-1105P-201ENST00000384774 107 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 SSXP10-201ENST00000402595 565 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 RPS4XP9-201ENST00000405151 780 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 MIR548K-201ENST00000408406 116 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 MTND6P12-201ENST00000428247 522 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 RPL36AP6-201ENST00000435770 321 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 SNRPEP4-201ENST00000435815 279 ntBASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.34□□□□□ -1.55
UBE3DQ7Z6J8 AL138799.3-201ENST00000438968 350 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms