Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 AC022509.4-201ENST00000621404 572 ntBASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 CR381572.1-201ENST00000625098 102 ntBASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 AL672296.1-201ENST00000427780 2158 ntBASIC3.92□□□□□ -1.78
NUP54Q7Z3B4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 OR4A15-201ENST00000314706 1035 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC126755.2-208ENST00000327792 462 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC138969.1-213ENST00000331436 462 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 RNU6-560P-201ENST00000364007 108 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 SNORD116.1-201ENST00000365628 92 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 RNU6-761P-201ENST00000384148 107 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 PTMAP5-201ENST00000393073 333 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AL133384.1-201ENST00000412744 351 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 MTCO3P1-205ENST00000422088 832 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 HLA-N-201ENST00000437516 135 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC069285.2-201ENST00000440210 275 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 Z73417.1-201ENST00000447373 778 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 TPT1P12-201ENST00000448968 492 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 RPS24P6-201ENST00000452670 400 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC010469.1-201ENST00000463864 576 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC010618.1-201ENST00000469924 477 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC041039.1-201ENST00000485656 536 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC026979.1-201ENST00000492525 396 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 RNU6-1225P-201ENST00000516336 65 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 RNA5SP519-201ENST00000516480 119 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 SNORA48.10-201ENST00000516965 160 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 IGLV3-26-201ENST00000520756 302 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 ZNF705CP-201ENST00000530515 889 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC023575.1-201ENST00000580510 358 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 BNIP3P26-201ENST00000600827 554 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC090116.1-201ENST00000615679 446 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 AC008785.1-201ENST00000624475 456 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 MIR6830-201ENST00000636015 70 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 MKKS-204ENST00000639674 192 ntBASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP54Q7Z3B4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
NUP54Q7Z3B4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUP54Q7Z3B4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NUP54Q7Z3B4 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.9□□□□□ -1.78
NUP54Q7Z3B4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.9□□□□□ -1.78
NUP54Q7Z3B4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUP54Q7Z3B4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MIR383-201ENST00000362257 73 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MIR513B-201ENST00000385136 84 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AL583835.1-201ENST00000399570 407 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AP000567.1-201ENST00000406413 156 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 MIR1179-201ENST00000408703 91 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 RN7SKP182-201ENST00000410772 298 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 RPL23AP46-201ENST00000438548 490 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 RPL23AP16-201ENST00000441715 421 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 NUTF2P3-201ENST00000448540 384 ntBASIC3.9□□□□□ -1.79
NUP54Q7Z3B4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms