Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 RNU6-694P-201ENST00000364071 147 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 MIR589-201ENST00000385238 99 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 RNU2-41P-201ENST00000410991 178 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 FAR2P2-201ENST00000413041 594 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AL807761.1-201ENST00000417622 171 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 FAR2P4-202ENST00000425399 584 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC234779.1-201ENST00000425910 285 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 FCF1P1-201ENST00000432690 571 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 SNRPEP8-201ENST00000442866 260 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 RPL21P133-201ENST00000443666 476 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 C1DP4-201ENST00000455429 424 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC087879.1-201ENST00000474343 374 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 RPS3AP14-201ENST00000483907 780 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AP001025.2-201ENST00000490908 477 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC114967.1-201ENST00000504890 259 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 OR7H2P-201ENST00000513483 306 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC104057.1-201ENST00000515547 497 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AL671862.1-201ENST00000515851 349 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 RNU6-513P-201ENST00000516104 104 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 RNU6-358P-201ENST00000516564 75 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC027369.5-201ENST00000533838 755 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC006349.1-201ENST00000555526 235 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AL845331.3-202ENST00000562856 261 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC105254.2-201ENST00000603636 436 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AL031320.1-201ENST00000604177 357 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AP003122.6-201ENST00000623831 495 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC093849.1-201ENST00000563631 2209 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AC025574.1-201ENST00000554784 1653 ntBASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.68□□□□□ -1.5
RUFY4Q6ZNE9 AL049780.3-201ENST00000624612 1583 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 AC092447.10-201ENST00000620607 1652 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 AC012618.3-205ENST00000637896 1496 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 Y_RNA.11-201ENST00000362375 109 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 Y_RNA.481-201ENST00000384373 102 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 AC016769.3-201ENST00000396562 315 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 AC016397.1-201ENST00000412463 242 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 AC245028.1-201ENST00000423259 256 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 USP9YP36-201ENST00000424581 829 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 AL589872.1-201ENST00000426602 288 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 ISCA1P6-201ENST00000427740 390 ntBASIC5.67□□□□□ -1.5
RUFY4Q6ZNE9 ELOCP14-201ENST00000428070 331 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms