Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC087783.2-201ENST00000605070 562 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 CRYM-AS1-204ENST00000637983 556 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 MIR4302-201ENST00000638058 60 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 DCAF13P1-201ENST00000495256 1330 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC011266.1-201ENST00000624119 3569 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 RNU6-853P-201ENST00000364306 107 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 Y_RNA.234-201ENST00000364409 97 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 RHOT1P2-201ENST00000366423 333 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 RNU6-1207P-201ENST00000384343 107 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 RNA5SP39-201ENST00000411245 120 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 RPL36AP36-201ENST00000418616 301 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 OR8F1P-201ENST00000425243 930 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 FAM103A2P-201ENST00000444122 354 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 USP9YP29-201ENST00000445112 563 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 PABPC1P6-201ENST00000445594 1829 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 TCEA1P1-201ENST00000449716 880 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AL353691.1-201ENST00000451332 387 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC092647.2-201ENST00000452998 253 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 RN7SL172P-201ENST00000460535 303 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC053481.1-201ENST00000467217 306 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 ST13P14-201ENST00000474095 734 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 RN7SL799P-201ENST00000475891 298 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 SNRPCP2-201ENST00000504370 475 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 COX6B1P5-201ENST00000509843 249 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC008694.2-201ENST00000517591 306 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AP002001.2-201ENST00000529025 1469 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC007225.2-201ENST00000562529 256 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 MIR3611-201ENST00000584484 83 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC008759.1-201ENST00000589783 983 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC009643.2-201ENST00000603543 1448 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC105254.2-201ENST00000603636 436 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC091965.4-201ENST00000607691 587 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC010678.1-201ENST00000614118 713 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 RMST_9.1-201ENST00000619945 193 ntBASIC4.59□□□□□ -1.67
RNF220Q5VTB9 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF220Q5VTB9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RNF220Q5VTB9 AL136964.1-201ENST00000622038 2990 ntBASIC4.59□□□□□ -1.68
RNF220Q5VTB9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 MAPK10-320ENST00000641462 6696 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 CCT4P2-201ENST00000233836 1548 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 SNURFL-201ENST00000309296 343 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 RNU6-97P-201ENST00000363387 104 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 SNORA70.10-201ENST00000384515 134 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 RNU6-837P-201ENST00000391056 108 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 U3.36-201ENST00000408418 213 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AC245052.5-201ENST00000416320 649 ntBASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF220Q5VTB9 AIMP1P1-201ENST00000418670 937 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms