Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC022079.2-201ENST00000619739 566 ntBASIC3.25□□□□□ -1.89
HMGCS1Q01581 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.25□□□□□ -1.89
HMGCS1Q01581 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGCS1Q01581 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGCS1Q01581 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGCS1Q01581 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
HMGCS1Q01581 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 HSPA8P19-201ENST00000505359 1517 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS1Q01581 USP8P1-201ENST00000494673 3183 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS1Q01581 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS1Q01581 RNU1-75P-201ENST00000347264 129 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 MIR449B-201ENST00000384995 97 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 MIR218-2-201ENST00000385006 110 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 DNAJC19P6-201ENST00000401853 280 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 ATP5F1P6-201ENST00000402768 767 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 RNA5SP31-201ENST00000411144 127 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 RNU2-6P-201ENST00000411404 190 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 RPL37P1-201ENST00000432310 284 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 RPL21P23-201ENST00000446654 460 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC092685.1-201ENST00000447960 1243 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 RPL29P29-201ENST00000448725 423 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 PLGLA-201ENST00000465668 449 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 RPL6P9-201ENST00000466502 859 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC078857.1-201ENST00000469870 667 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC005921.1-201ENST00000510589 286 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 RN7SKP157-201ENST00000516174 282 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 OR4R3P-201ENST00000525084 838 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 OR8I1P-201ENST00000529291 931 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 OR8L1P-201ENST00000534005 955 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC005476.1-201ENST00000554427 397 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC106734.1-201ENST00000568646 663 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 MIR4444-1-201ENST00000581696 74 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 MIR4444-2-201ENST00000584390 74 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 RMST_10.1-201ENST00000616309 154 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 XIST_intron.1-201ENST00000619444 68 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC243312.2-201ENST00000623340 601 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC097372.4-201ENST00000625025 466 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 AC127502.3-201ENST00000636170 1206 ntBASIC3.24□□□□□ -1.89
HMGCS1Q01581 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS1Q01581 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS1Q01581 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGCS1Q01581 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGCS1Q01581 MFSD8-213ENST00000641134 1327 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC017071.1-201ENST00000564407 2204 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS1Q01581 RPS7P13-201ENST00000413955 498 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC093578.1-201ENST00000415219 368 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC007390.1-201ENST00000415722 356 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 HMGN2P31-201ENST00000432430 273 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 VN1R34P-201ENST00000447387 883 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 PDSS1P2-201ENST00000449397 678 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 RN7SL330P-201ENST00000469709 307 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC112198.1-201ENST00000505369 1220 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC008628.1-201ENST00000508663 265 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC093755.1-201ENST00000512950 1023 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 IGKV2-26-201ENST00000518305 343 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 HIGD1AP10-201ENST00000527837 282 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 OR5B10P-201ENST00000532869 642 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC090751.1-201ENST00000566966 267 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 MIR3922-201ENST00000585192 84 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC010928.3-201ENST00000587712 541 ntBASIC3.23□□□□□ -1.89
HMGCS1Q01581 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGCS1Q01581 AC006557.5-201ENST00000603126 811 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms