Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RPS29P7-201ENST00000439662 171 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.95□□□□□ -1.78
CDK3Q00526 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK3Q00526 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK3Q00526 FABP3P2-201ENST00000453169 399 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK3Q00526 KLRA1P-201ENST00000503499 986 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 WBP1LP4-201ENST00000505043 344 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 AC034244.1-201ENST00000507687 207 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 AC079395.1-201ENST00000510981 262 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 AC109445.1-201ENST00000512356 383 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK3Q00526 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK3Q00526 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK3Q00526 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.95□□□□□ -1.78
CDK3Q00526 AC092470.1-201ENST00000546187 132 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK3Q00526 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.95□□□□□ -1.78
CDK3Q00526 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK3Q00526 AC115621.1-201ENST00000604653 858 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 AP001521.1-201ENST00000609150 300 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 AC105429.2-201ENST00000610567 517 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 AC021755.4-201ENST00000616620 456 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 AC121761.2-201ENST00000617300 689 ntBASIC3.95□□□□□ -1.78
CDK3Q00526 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CDK3Q00526 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CDK3Q00526 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.95□□□□□ -1.78
CDK3Q00526 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK3Q00526 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDK3Q00526 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDK3Q00526 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDK3Q00526 AC016588.2-201ENST00000632484 3021 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK3Q00526 SAGE4P-201ENST00000442271 3381 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 RNA5SP388-201ENST00000362584 119 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 RNA5SP399-201ENST00000364003 117 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDK3Q00526 MIR1251-201ENST00000408552 70 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AL133384.1-201ENST00000412744 351 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.94□□□□□ -1.78
CDK3Q00526 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK3Q00526 AL139421.1-201ENST00000423010 169 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC104073.1-201ENST00000451988 151 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 RPL12P26-201ENST00000452430 487 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 TRBV26-201ENST00000456572 344 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AL133477.1-201ENST00000457472 514 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 MTND1P16-201ENST00000465177 898 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 RPL5P30-201ENST00000465511 891 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AL136126.1-201ENST00000473603 402 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC021146.5-201ENST00000503544 545 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CDK3Q00526 RNA5SP179-201ENST00000517284 121 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 MRPS36P3-201ENST00000519284 130 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK3Q00526 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 LRRC34P1-201ENST00000542742 915 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC022968.1-201ENST00000567372 442 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AC005255.1-201ENST00000593748 216 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC245036.5-201ENST00000596330 847 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AL009028.1-201ENST00000604895 802 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AC091167.4-201ENST00000605079 184 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC231759.1-201ENST00000616455 597 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 AC008147.4-201ENST00000617570 1204 ntBASIC3.94□□□□□ -1.78
CDK3Q00526 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDK3Q00526 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK3Q00526 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CDK3Q00526 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.94□□□□□ -1.78
CDK3Q00526 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK3Q00526 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDK3Q00526 FAM133CP-201ENST00000332869 704 ntBASIC3.93□□□□□ -1.78
CDK3Q00526 RNU6-216P-201ENST00000363282 104 ntBASIC3.93□□□□□ -1.78
CDK3Q00526 RNU6-213P-201ENST00000384051 104 ntBASIC3.93□□□□□ -1.78
CDK3Q00526 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDK3Q00526 AC025750.1-201ENST00000399891 379 ntBASIC3.93□□□□□ -1.78
CDK3Q00526 AC068533.2-201ENST00000411872 306 ntBASIC3.93□□□□□ -1.78
CDK3Q00526 AL160275.2-201ENST00000412010 394 ntBASIC3.93□□□□□ -1.78
CDK3Q00526 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.93□□□□□ -1.78
CDK3Q00526 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.93□□□□□ -1.78
CDK3Q00526 HIGD1AP4-201ENST00000430194 280 ntBASIC3.93□□□□□ -1.78
CDK3Q00526 MTCO2P20-201ENST00000437339 673 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms