Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNA1P78396 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNA1P78396 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNA1P78396 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.91□□□□□ -1.78
CCNA1P78396 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNA1P78396 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.91□□□□□ -1.78
CCNA1P78396 AC004024.1-201ENST00000549244 247 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNA1P78396 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNA1P78396 SERPINE4P-201ENST00000554978 281 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNA1P78396 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNA1P78396 AC015911.5-201ENST00000587076 451 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 AC015849.2-201ENST00000605738 409 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 AC006023.2-201ENST00000609916 167 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCNA1P78396 AL162274.2-201ENST00000614406 332 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCNA1P78396 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.91□□□□□ -1.78
CCNA1P78396 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.78
CCNA1P78396 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.9□□□□□ -1.79
CCNA1P78396 RPL23AP57-201ENST00000332361 466 ntBASIC3.9□□□□□ -1.79
CCNA1P78396 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCNA1P78396 HMGN1P24-201ENST00000412282 298 ntBASIC3.9□□□□□ -1.79
CCNA1P78396 MTND4P22-201ENST00000413116 1169 ntBASIC3.9□□□□□ -1.79
CCNA1P78396 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNA1P78396 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.9□□□□□ -1.79
CCNA1P78396 AC069540.1-201ENST00000446320 988 ntBASIC3.9□□□□□ -1.79
CCNA1P78396 AL513343.1-201ENST00000451818 792 ntBASIC3.9□□□□□ -1.79
CCNA1P78396 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.9□□□□□ -1.79
CCNA1P78396 AC010306.1-201ENST00000523223 1117 ntBASIC3.9□□□□□ -1.79
CCNA1P78396 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.9□□□□□ -1.79
CCNA1P78396 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.9□□□□□ -1.79
CCNA1P78396 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNA1P78396 AC005858.4-201ENST00000623191 700 ntBASIC3.9□□□□□ -1.79
CCNA1P78396 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCNA1P78396 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CCNA1P78396 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCNA1P78396 AC058791.1-201ENST00000608412 3198 ntBASIC3.9□□□□□ -1.79
CCNA1P78396 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCNA1P78396 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCNA1P78396 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.89□□□□□ -1.79
CCNA1P78396 RNA5SP42-201ENST00000364278 115 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNA1P78396 RNU1-89P-201ENST00000384592 164 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 AL122016.1-201ENST00000403365 367 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNA1P78396 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNA1P78396 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.89□□□□□ -1.79
CCNA1P78396 HMGB1P12-201ENST00000438594 598 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 AC127537.2-201ENST00000439258 465 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 Z75741.1-201ENST00000446793 314 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 RPS3AP43-201ENST00000479743 781 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 AC126121.1-201ENST00000482313 553 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 RPS4XP13-201ENST00000483219 789 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 RPS3AP14-201ENST00000483907 780 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 HMGB3P14-201ENST00000494195 599 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 MTCO1P31-201ENST00000506355 492 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNA1P78396 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNA1P78396 RN7SKP289-201ENST00000517244 295 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 AC090136.1-201ENST00000520009 240 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNA1P78396 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNA1P78396 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.89□□□□□ -1.79
CCNA1P78396 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNA1P78396 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.89□□□□□ -1.79
CCNA1P78396 AC073657.2-201ENST00000605661 303 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 AC011374.2-201ENST00000607135 526 ntBASIC3.89□□□□□ -1.79
CCNA1P78396 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCNA1P78396 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCNA1P78396 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CCNA1P78396 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.89□□□□□ -1.79
CCNA1P78396 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CCNA1P78396 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCNA1P78396 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCNA1P78396 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCNA1P78396 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCNA1P78396 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNA1P78396 SNORA51.12-201ENST00000384448 134 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCNA1P78396 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCNA1P78396 AL357075.1-201ENST00000404107 726 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 PRRC2CP1-201ENST00000404428 159 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.88□□□□□ -1.79
CCNA1P78396 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.88□□□□□ -1.79
CCNA1P78396 AC017079.2-201ENST00000416102 485 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNA1P78396 MTCYBP24-201ENST00000420387 1106 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 AC244098.2-201ENST00000422068 99 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNA1P78396 TPTE2P1-204ENST00000435256 593 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNA1P78396 AC097262.1-201ENST00000452559 548 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 S100A11P2-201ENST00000467589 312 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 NIPA2P2-201ENST00000496376 1083 ntBASIC3.88□□□□□ -1.79
CCNA1P78396 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CCNA1P78396 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.88□□□□□ -1.79
CCNA1P78396 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms