Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM4P67936 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.49□□□□□ -1.85
TPM4P67936 LRRC77P-213ENST00000637727 880 ntBASIC3.49□□□□□ -1.85
TPM4P67936 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TPM4P67936 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TPM4P67936 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TPM4P67936 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TPM4P67936 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM4P67936 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
TPM4P67936 SNORA5A-201ENST00000384111 134 ntBASIC3.48□□□□□ -1.85
TPM4P67936 EIF5P1-201ENST00000400019 1231 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AL031121.1-201ENST00000406553 254 ntBASIC3.48□□□□□ -1.85
TPM4P67936 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.48□□□□□ -1.85
TPM4P67936 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.48□□□□□ -1.85
TPM4P67936 AJ239321.1-201ENST00000424255 564 ntBASIC3.48□□□□□ -1.85
TPM4P67936 DPPA2P1-201ENST00000428060 556 ntBASIC3.48□□□□□ -1.85
TPM4P67936 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.48□□□□□ -1.85
TPM4P67936 AL035246.1-201ENST00000433554 1255 ntBASIC3.48□□□□□ -1.85
TPM4P67936 HSPD1P21-201ENST00000436541 245 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.48□□□□□ -1.85
TPM4P67936 COX6CP2-201ENST00000444980 225 ntBASIC3.48□□□□□ -1.85
TPM4P67936 RPL7P52-201ENST00000449200 742 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AC009220.1-201ENST00000451614 275 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AL513343.1-201ENST00000451818 792 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.48□□□□□ -1.85
TPM4P67936 RN7SL633P-201ENST00000488974 297 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.48□□□□□ -1.85
TPM4P67936 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.48□□□□□ -1.85
TPM4P67936 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.48□□□□□ -1.85
TPM4P67936 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.48□□□□□ -1.85
TPM4P67936 AC074029.1-201ENST00000552531 1044 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AL163153.1-201ENST00000554223 283 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AL049870.4-201ENST00000555741 486 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.48□□□□□ -1.85
TPM4P67936 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.48□□□□□ -1.85
TPM4P67936 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.48□□□□□ -1.85
TPM4P67936 AC136624.4-201ENST00000573044 370 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TPM4P67936 AC138473.1-201ENST00000605717 526 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AC004832.5-201ENST00000608677 401 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AC069234.5-201ENST00000611056 416 ntBASIC3.48□□□□□ -1.85
TPM4P67936 AC244258.1-201ENST00000637553 1071 ntBASIC3.48□□□□□ -1.85
TPM4P67936 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.48□□□□□ -1.85
TPM4P67936 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TPM4P67936 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.48□□□□□ -1.85
TPM4P67936 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.48□□□□□ -1.85
TPM4P67936 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM4P67936 AL355578.1-201ENST00000607405 1328 ntBASIC3.47□□□□□ -1.85
TPM4P67936 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.47□□□□□ -1.85
TPM4P67936 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TPM4P67936 RNU6-335P-201ENST00000364563 113 ntBASIC3.47□□□□□ -1.85
TPM4P67936 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TPM4P67936 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TPM4P67936 HMGN1P24-201ENST00000412282 298 ntBASIC3.47□□□□□ -1.85
TPM4P67936 CASKP1-201ENST00000412870 582 ntBASIC3.47□□□□□ -1.85
TPM4P67936 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM4P67936 OR51AB1P-201ENST00000429046 620 ntBASIC3.47□□□□□ -1.85
TPM4P67936 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.47□□□□□ -1.85
TPM4P67936 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.47□□□□□ -1.85
TPM4P67936 AC108734.1-201ENST00000439549 399 ntBASIC3.47□□□□□ -1.85
TPM4P67936 Z99127.2-201ENST00000441426 334 ntBASIC3.47□□□□□ -1.85
TPM4P67936 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.47□□□□□ -1.85
TPM4P67936 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.47□□□□□ -1.85
TPM4P67936 HMGB1P38-201ENST00000490557 577 ntBASIC3.47□□□□□ -1.85
TPM4P67936 RPL7P23-201ENST00000493874 747 ntBASIC3.47□□□□□ -1.85
TPM4P67936 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.47□□□□□ -1.85
TPM4P67936 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.47□□□□□ -1.85
TPM4P67936 MTCO1P49-201ENST00000523429 802 ntBASIC3.47□□□□□ -1.85
TPM4P67936 AC023158.1-201ENST00000561632 1025 ntBASIC3.47□□□□□ -1.85
TPM4P67936 AC005951.1-201ENST00000576706 485 ntBASIC3.47□□□□□ -1.85
TPM4P67936 MIR5186-201ENST00000577504 120 ntBASIC3.47□□□□□ -1.85
TPM4P67936 MIR2682-201ENST00000580305 110 ntBASIC3.47□□□□□ -1.85
TPM4P67936 AC012119.1-201ENST00000603184 222 ntBASIC3.47□□□□□ -1.85
TPM4P67936 AC067959.1-201ENST00000604334 379 ntBASIC3.47□□□□□ -1.85
TPM4P67936 AC112230.1-201ENST00000604342 547 ntBASIC3.47□□□□□ -1.85
TPM4P67936 AC015849.2-201ENST00000605738 409 ntBASIC3.47□□□□□ -1.85
TPM4P67936 U6.48-201ENST00000618523 106 ntBASIC3.47□□□□□ -1.85
TPM4P67936 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM4P67936 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
TPM4P67936 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.47□□□□□ -1.85
TPM4P67936 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
TPM4P67936 AL136164.4-201ENST00000625013 2135 ntBASIC3.46□□□□□ -1.86
TPM4P67936 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
TPM4P67936 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.46□□□□□ -1.86
TPM4P67936 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TPM4P67936 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.46□□□□□ -1.86
TPM4P67936 RN7SKP227-201ENST00000364445 330 ntBASIC3.46□□□□□ -1.86
TPM4P67936 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TPM4P67936 RNU6-1293P-201ENST00000384077 107 ntBASIC3.46□□□□□ -1.86
TPM4P67936 MIR141-201ENST00000384975 95 ntBASIC3.46□□□□□ -1.86
TPM4P67936 AL138880.1-201ENST00000405824 642 ntBASIC3.46□□□□□ -1.86
TPM4P67936 RN7SKP263-201ENST00000411194 309 ntBASIC3.46□□□□□ -1.86
TPM4P67936 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.46□□□□□ -1.86
TPM4P67936 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.46□□□□□ -1.86
TPM4P67936 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.46□□□□□ -1.86
TPM4P67936 AL160175.1-201ENST00000428124 247 ntBASIC3.46□□□□□ -1.86
TPM4P67936 AC004975.1-201ENST00000428733 208 ntBASIC3.46□□□□□ -1.86
TPM4P67936 HMGN2P20-201ENST00000437531 273 ntBASIC3.46□□□□□ -1.86
TPM4P67936 HIGD1AP11-201ENST00000438361 280 ntBASIC3.46□□□□□ -1.86
TPM4P67936 TPTE2P6-202ENST00000445572 1007 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms