Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU6-952P-201ENST00000391164 108 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC092017.2-201ENST00000427600 362 ntBASIC5.17□□□□□ -1.58
YBX1P67809 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.17□□□□□ -1.58
YBX1P67809 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.17□□□□□ -1.58
YBX1P67809 AC073850.1-201ENST00000449243 255 ntBASIC5.17□□□□□ -1.58
YBX1P67809 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.17□□□□□ -1.58
YBX1P67809 PRPF38AP1-201ENST00000451976 933 ntBASIC5.17□□□□□ -1.58
YBX1P67809 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.17□□□□□ -1.58
YBX1P67809 GAPDHP56-201ENST00000506031 988 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.17□□□□□ -1.58
YBX1P67809 PCBP2P3-201ENST00000509726 843 ntBASIC5.17□□□□□ -1.58
YBX1P67809 SNORA70.11-201ENST00000515987 138 ntBASIC5.17□□□□□ -1.58
YBX1P67809 SNORA70.13-201ENST00000516116 138 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC008562.1-201ENST00000521763 330 ntBASIC5.17□□□□□ -1.58
YBX1P67809 LSM3P2-201ENST00000551246 273 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC127381.1-201ENST00000555979 939 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC079075.1-201ENST00000559543 878 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC068714.1-201ENST00000559623 800 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC040958.1-201ENST00000561102 201 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.17□□□□□ -1.58
YBX1P67809 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.17□□□□□ -1.58
YBX1P67809 MIR3167-201ENST00000579623 85 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC090312.1-201ENST00000580637 348 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.17□□□□□ -1.58
YBX1P67809 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.17□□□□□ -1.58
YBX1P67809 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.17□□□□□ -1.58
YBX1P67809 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.17□□□□□ -1.58
YBX1P67809 AC008737.2-201ENST00000599446 118 ntBASIC5.17□□□□□ -1.58
YBX1P67809 IMMP1LP3-201ENST00000604197 224 ntBASIC5.17□□□□□ -1.58
YBX1P67809 AC090617.10-201ENST00000624308 134 ntBASIC5.17□□□□□ -1.58
YBX1P67809 CYP4F35P-202ENST00000636121 390 ntBASIC5.17□□□□□ -1.58
YBX1P67809 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
YBX1P67809 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 AC235565.1-201ENST00000456962 1325 ntBASIC5.17□□□□□ -1.58
YBX1P67809 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
YBX1P67809 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
YBX1P67809 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.17□□□□□ -1.58
YBX1P67809 MTND4P35-201ENST00000604257 1375 ntBASIC5.16□□□□□ -1.58
YBX1P67809 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.16□□□□□ -1.58
YBX1P67809 AC011755.1-201ENST00000623763 2049 ntBASIC5.16□□□□□ -1.58
YBX1P67809 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.16□□□□□ -1.58
YBX1P67809 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 RNA5SP183-201ENST00000362452 119 ntBASIC5.16□□□□□ -1.58
YBX1P67809 Y_RNA.387-201ENST00000383918 102 ntBASIC5.16□□□□□ -1.58
YBX1P67809 SNORA20.2-201ENST00000383922 131 ntBASIC5.16□□□□□ -1.58
YBX1P67809 RNU6-474P-201ENST00000384243 107 ntBASIC5.16□□□□□ -1.58
YBX1P67809 Y_RNA.459-201ENST00000384251 102 ntBASIC5.16□□□□□ -1.58
YBX1P67809 Y_RNA.579-201ENST00000390939 94 ntBASIC5.16□□□□□ -1.58
YBX1P67809 HMGB1P17-201ENST00000403495 628 ntBASIC5.16□□□□□ -1.58
YBX1P67809 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
YBX1P67809 AC019097.1-201ENST00000424783 735 ntBASIC5.16□□□□□ -1.58
YBX1P67809 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.16□□□□□ -1.58
YBX1P67809 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.16□□□□□ -1.58
YBX1P67809 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 CBX1P2-201ENST00000453841 458 ntBASIC5.16□□□□□ -1.58
YBX1P67809 SNORD19B-201ENST00000459623 84 ntBASIC5.16□□□□□ -1.58
YBX1P67809 MRPS17P3-201ENST00000465453 385 ntBASIC5.16□□□□□ -1.58
YBX1P67809 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.16□□□□□ -1.58
YBX1P67809 AC024558.1-201ENST00000505008 528 ntBASIC5.16□□□□□ -1.58
YBX1P67809 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 SNORD60.2-201ENST00000516883 86 ntBASIC5.16□□□□□ -1.58
YBX1P67809 RNU6-201P-201ENST00000517100 61 ntBASIC5.16□□□□□ -1.58
YBX1P67809 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.16□□□□□ -1.58
YBX1P67809 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.16□□□□□ -1.58
YBX1P67809 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.16□□□□□ -1.58
YBX1P67809 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.16□□□□□ -1.58
YBX1P67809 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.16□□□□□ -1.58
YBX1P67809 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 AC008638.3-201ENST00000603341 463 ntBASIC5.16□□□□□ -1.58
YBX1P67809 AL022394.1-201ENST00000606979 292 ntBASIC5.16□□□□□ -1.58
YBX1P67809 AP001521.2-201ENST00000608772 546 ntBASIC5.16□□□□□ -1.58
YBX1P67809 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 MTND5P16-201ENST00000460269 1703 ntBASIC5.16□□□□□ -1.58
YBX1P67809 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
YBX1P67809 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.16□□□□□ -1.58
YBX1P67809 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
YBX1P67809 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
YBX1P67809 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
YBX1P67809 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.15□□□□□ -1.58
YBX1P67809 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms