Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CDH13P55290 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH13P55290 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH13P55290 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH13P55290 SNRPEP3-201ENST00000338402 276 ntBASIC3.93□□□□□ -1.78
CDH13P55290 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
CDH13P55290 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH13P55290 RNU1-89P-201ENST00000384592 164 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH13P55290 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH13P55290 RN7SKP56-201ENST00000410513 331 ntBASIC3.93□□□□□ -1.78
CDH13P55290 RPL23AP26-201ENST00000412728 464 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH13P55290 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH13P55290 RPL26P29-201ENST00000415623 438 ntBASIC3.93□□□□□ -1.78
CDH13P55290 CYP4F29P-201ENST00000420685 446 ntBASIC3.93□□□□□ -1.78
CDH13P55290 CHIAP3-201ENST00000423668 1133 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AC068287.1-201ENST00000430283 295 ntBASIC3.93□□□□□ -1.78
CDH13P55290 ATP5F1P1-201ENST00000433775 569 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH13P55290 AL645939.1-201ENST00000453429 797 ntBASIC3.93□□□□□ -1.78
CDH13P55290 PABPC1P3-201ENST00000469174 459 ntBASIC3.93□□□□□ -1.78
CDH13P55290 RN7SL738P-201ENST00000470264 297 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AC069499.1-201ENST00000489433 509 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH13P55290 HMGB1P28-201ENST00000507778 552 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH13P55290 C1GALT1P3-201ENST00000522049 819 ntBASIC3.93□□□□□ -1.78
CDH13P55290 OR4R3P-201ENST00000525084 838 ntBASIC3.93□□□□□ -1.78
CDH13P55290 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH13P55290 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH13P55290 CR383656.6-201ENST00000550518 394 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AC061975.8-201ENST00000587058 721 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AC025588.2-201ENST00000604851 466 ntBASIC3.93□□□□□ -1.78
CDH13P55290 AC009318.4-201ENST00000620496 486 ntBASIC3.93□□□□□ -1.78
CDH13P55290 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
CDH13P55290 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH13P55290 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CDH13P55290 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH13P55290 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 LARP1BP1-201ENST00000506036 1359 ntBASIC3.92□□□□□ -1.78
CDH13P55290 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
CDH13P55290 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH13P55290 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CDH13P55290 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CDH13P55290 MIR383-201ENST00000362257 73 ntBASIC3.92□□□□□ -1.78
CDH13P55290 Y_RNA.311-201ENST00000365068 96 ntBASIC3.92□□□□□ -1.78
CDH13P55290 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH13P55290 HIGD1AP15-201ENST00000416198 280 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH13P55290 AL592293.2-201ENST00000422292 996 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH13P55290 AC245028.1-201ENST00000423259 256 ntBASIC3.92□□□□□ -1.78
CDH13P55290 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 HMGB3P5-201ENST00000428894 612 ntBASIC3.92□□□□□ -1.78
CDH13P55290 RPS6P12-201ENST00000432491 726 ntBASIC3.92□□□□□ -1.78
CDH13P55290 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 AF228730.2-201ENST00000438784 848 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AL356535.1-201ENST00000440335 398 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH13P55290 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH13P55290 AC092757.1-201ENST00000467293 467 ntBASIC3.92□□□□□ -1.78
CDH13P55290 S100A11P1-201ENST00000477525 312 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC091167.1-201ENST00000492017 396 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH13P55290 AC026726.1-201ENST00000512859 601 ntBASIC3.92□□□□□ -1.78
CDH13P55290 FABP5P12-201ENST00000515543 389 ntBASIC3.92□□□□□ -1.78
CDH13P55290 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH13P55290 IGKV2D-36-201ENST00000518643 226 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH13P55290 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH13P55290 EEF1A1P37-201ENST00000522748 715 ntBASIC3.92□□□□□ -1.78
CDH13P55290 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH13P55290 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH13P55290 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CDH13P55290 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH13P55290 AC010198.2-201ENST00000550612 259 ntBASIC3.92□□□□□ -1.78
CDH13P55290 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH13P55290 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH13P55290 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH13P55290 MIR4277-201ENST00000578298 84 ntBASIC3.92□□□□□ -1.78
CDH13P55290 MIR4700-201ENST00000578311 74 ntBASIC3.92□□□□□ -1.78
CDH13P55290 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH13P55290 AC008745.1-201ENST00000604064 271 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC107952.2-201ENST00000606048 486 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC063944.3-201ENST00000609969 533 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC090116.1-201ENST00000615679 446 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC121761.2-201ENST00000617300 689 ntBASIC3.92□□□□□ -1.78
CDH13P55290 U73479.1-201ENST00000618062 168 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC069209.1-201ENST00000619282 651 ntBASIC3.92□□□□□ -1.78
CDH13P55290 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH13P55290 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH13P55290 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms