Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGCS2P54868 AL139811.1-201ENST00000424779 2299 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGCS2P54868 SNORA62.2-201ENST00000364672 152 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 RNA5SP235-201ENST00000365411 114 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 RNU6-317P-201ENST00000384031 107 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 ATF1P1-201ENST00000406040 927 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 AC069282.1-201ENST00000411911 526 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 MTND4P11-201ENST00000417020 1058 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 MTCO3P4-201ENST00000419236 787 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGCS2P54868 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGCS2P54868 S100A11P1-201ENST00000477525 312 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 AC109925.1-201ENST00000478069 331 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.86□□□□□ -1.79
HMGCS2P54868 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGCS2P54868 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGCS2P54868 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGCS2P54868 HIGD1AP1-201ENST00000550979 275 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGCS2P54868 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGCS2P54868 AP005229.2-201ENST00000609980 697 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 VN1R9P-201ENST00000614184 867 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 AC017007.4-201ENST00000503353 1352 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 RNF6P1-201ENST00000444889 1784 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGCS2P54868 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
HMGCS2P54868 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGCS2P54868 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 AL136964.1-201ENST00000622038 2990 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS2P54868 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HMGCS2P54868 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS2P54868 MIR422A-201ENST00000362286 90 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 SNORD56.4-201ENST00000363883 71 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS2P54868 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HMGCS2P54868 RNU6-354P-201ENST00000383862 107 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 RNU6-610P-201ENST00000384264 107 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 LIPT1P1-201ENST00000415870 1186 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGCS2P54868 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGCS2P54868 FO393414.1-201ENST00000428697 1184 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 IFNNP1-201ENST00000429219 553 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC005189.1-201ENST00000431286 310 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HMGCS2P54868 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HMGCS2P54868 AC008379.1-201ENST00000463655 464 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC093801.2-201ENST00000503966 1050 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS2P54868 AC112518.2-201ENST00000508565 425 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 PTGES3P3-201ENST00000511479 482 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC010374.2-201ENST00000512933 535 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 RN7SKP116-201ENST00000516902 319 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS2P54868 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGCS2P54868 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGCS2P54868 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.85□□□□□ -1.79
HMGCS2P54868 MIR4298-201ENST00000584380 73 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGCS2P54868 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS2P54868 AL139395.1-201ENST00000603662 160 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC011458.1-201ENST00000604034 617 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGCS2P54868 AC021851.1-201ENST00000608537 1082 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AP000240.1-201ENST00000609910 452 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC005156.1-201ENST00000613371 573 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC018926.1-201ENST00000616335 435 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 AC022149.2-201ENST00000621061 203 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGCS2P54868 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGCS2P54868 CR383658.2-201ENST00000547576 1525 ntBASIC3.85□□□□□ -1.79
HMGCS2P54868 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGCS2P54868 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS2P54868 AC018555.1-201ENST00000567548 1980 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS2P54868 COTL1P1-201ENST00000422309 375 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AL354692.1-201ENST00000423044 315 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 RPS12P5-201ENST00000423449 371 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS2P54868 MTCO1P43-201ENST00000431831 488 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC236972.1-201ENST00000433225 199 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 RNF2P1-201ENST00000442955 1010 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AL357552.1-201ENST00000445254 415 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 RPL34P26-201ENST00000445636 354 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGCS2P54868 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGCS2P54868 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS2P54868 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS2P54868 RN7SL863P-201ENST00000462370 296 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC080014.1-201ENST00000496877 1201 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.84□□□□□ -1.79
HMGCS2P54868 PRELID3BP7-201ENST00000503606 469 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS2P54868 RNU5A-7P-201ENST00000515979 116 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC104115.2-201ENST00000523026 687 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AP003066.2-201ENST00000529375 555 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGCS2P54868 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms