Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC090960.1-201ENST00000421072 306 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AL050321.1-201ENST00000432363 400 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AL445567.1-201ENST00000439121 144 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 MTCYBP34-201ENST00000439552 670 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 SNRPGP5-201ENST00000456003 220 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCNKAP51800 ACTG1P13-201ENST00000486987 1043 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCNKAP51800 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCNKAP51800 SETP14-201ENST00000497538 873 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC108145.1-201ENST00000503770 153 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.12□□□□□ -1.75
CLCNKAP51800 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.12□□□□□ -1.75
CLCNKAP51800 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 MIR2116-201ENST00000517221 80 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 AC008694.2-201ENST00000517591 306 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC105185.1-201ENST00000518705 535 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 AL356057.1-201ENST00000533798 831 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 SERPINE4P-201ENST00000554978 281 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 MTCYBP27-201ENST00000555160 670 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC090888.1-201ENST00000561335 1141 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC093519.1-201ENST00000566109 298 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC109446.2-201ENST00000567872 497 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 OR4K7P-201ENST00000580232 945 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC022069.1-201ENST00000582910 658 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.12□□□□□ -1.75
CLCNKAP51800 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCNKAP51800 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 AC006539.2-201ENST00000601729 572 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 LLPHP1-201ENST00000603571 367 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC106791.2-201ENST00000604680 391 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC004825.2-201ENST00000616634 455 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC010608.2-201ENST00000624830 470 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 AC007671.2-201ENST00000637344 619 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 MKKS-204ENST00000639674 192 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 OR8B1P-202ENST00000641132 1178 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CLCNKAP51800 ERCC6-202ENST00000374127 1782 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 AC005539.1-201ENST00000443768 1479 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AC016588.2-201ENST00000632484 3021 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCNKAP51800 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCNKAP51800 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCNKAP51800 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCNKAP51800 RNU6-115P-201ENST00000364310 107 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCNKAP51800 ENSAP1-201ENST00000392855 326 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 RNA5SP317-201ENST00000410176 116 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 RNA5SP311-201ENST00000411290 116 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AC068533.2-201ENST00000411872 306 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 RPS23P10-201ENST00000416185 486 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AC108032.1-201ENST00000416706 207 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCNKAP51800 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCNKAP51800 AC234781.2-201ENST00000426370 994 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 RPP40P1-201ENST00000426762 456 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCNKAP51800 AL513175.1-201ENST00000431492 780 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 GSTA7P-201ENST00000438425 448 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 HSFY6P-201ENST00000445573 403 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AL451050.1-201ENST00000450126 415 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 PPIAP3-201ENST00000450588 505 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 RNA5SP315-201ENST00000516340 116 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 RNU6-759P-201ENST00000516740 103 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 SNORA48.10-201ENST00000516965 160 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 RNA5SP312-201ENST00000517068 116 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCNKAP51800 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCNKAP51800 AC074029.1-201ENST00000552531 1044 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 EIF5A2P1-201ENST00000564027 460 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCNKAP51800 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCNKAP51800 AC002400.1-201ENST00000569310 726 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCNKAP51800 MIR3160-1-201ENST00000577972 85 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCNKAP51800 AC103881.1-201ENST00000603476 538 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AL591034.3-201ENST00000605511 685 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCNKAP51800 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCNKAP51800 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.11□□□□□ -1.75
CLCNKAP51800 AL607023.1-201ENST00000620045 248 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms