Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC073069.1-201ENST00000428657 441 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD4P46934 AC097713.2-201ENST00000430199 356 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 AL050321.1-201ENST00000432363 400 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD4P46934 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD4P46934 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD4P46934 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD4P46934 snoU109.3-201ENST00000459477 145 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD4P46934 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD4P46934 RPL7L1P8-201ENST00000469911 741 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.01□□□□□ -1.77
NEDD4P46934 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD4P46934 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.01□□□□□ -1.77
NEDD4P46934 PRELID3BP4-201ENST00000515476 571 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 COX6B1P6-201ENST00000522347 255 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD4P46934 AC092851.1-201ENST00000535964 478 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD4P46934 AC090312.2-201ENST00000582687 378 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD4P46934 CCDC58P3-201ENST00000590792 430 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 BNIP3P22-201ENST00000593399 556 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 AL606834.3-201ENST00000602615 496 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 AC093673.2-201ENST00000609674 331 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 AC019176.2-201ENST00000611579 315 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD4P46934 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD4P46934 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD4P46934 MTCO1P6-201ENST00000481192 1384 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 SNORA72.3-201ENST00000365074 132 ntBASIC4□□□□□ -1.77
NEDD4P46934 RNU6-549P-201ENST00000384433 107 ntBASIC4□□□□□ -1.77
NEDD4P46934 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
NEDD4P46934 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4□□□□□ -1.77
NEDD4P46934 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4□□□□□ -1.77
NEDD4P46934 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4□□□□□ -1.77
NEDD4P46934 AL590609.2-201ENST00000421430 368 ntBASIC4□□□□□ -1.77
NEDD4P46934 AC246680.2-201ENST00000422106 389 ntBASIC4□□□□□ -1.77
NEDD4P46934 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4□□□□□ -1.77
NEDD4P46934 NPM1P24-201ENST00000428039 894 ntBASIC4□□□□□ -1.77
NEDD4P46934 AC017083.1-201ENST00000428093 483 ntBASIC4□□□□□ -1.77
NEDD4P46934 AL158071.1-201ENST00000430315 461 ntBASIC4□□□□□ -1.77
NEDD4P46934 RPS7P5-201ENST00000441482 581 ntBASIC4□□□□□ -1.77
NEDD4P46934 TPTE2P6-202ENST00000445572 1007 ntBASIC4□□□□□ -1.77
NEDD4P46934 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4□□□□□ -1.77
NEDD4P46934 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 CYCSP35-201ENST00000451978 304 ntBASIC4□□□□□ -1.77
NEDD4P46934 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4□□□□□ -1.77
NEDD4P46934 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4□□□□□ -1.77
NEDD4P46934 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4□□□□□ -1.77
NEDD4P46934 AC010306.1-201ENST00000523223 1117 ntBASIC4□□□□□ -1.77
NEDD4P46934 OR4R3P-201ENST00000525084 838 ntBASIC4□□□□□ -1.77
NEDD4P46934 AP001636.2-201ENST00000525517 696 ntBASIC4□□□□□ -1.77
NEDD4P46934 AC124293.1-201ENST00000530034 493 ntBASIC4□□□□□ -1.77
NEDD4P46934 AL139174.1-201ENST00000531489 886 ntBASIC4□□□□□ -1.77
NEDD4P46934 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4□□□□□ -1.77
NEDD4P46934 AC090751.1-201ENST00000566966 267 ntBASIC4□□□□□ -1.77
NEDD4P46934 MTND4LP24-201ENST00000572277 291 ntBASIC4□□□□□ -1.77
NEDD4P46934 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4□□□□□ -1.77
NEDD4P46934 AC245884.10-201ENST00000597355 337 ntBASIC4□□□□□ -1.77
NEDD4P46934 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4□□□□□ -1.77
NEDD4P46934 AL355816.1-201ENST00000607951 118 ntBASIC4□□□□□ -1.77
NEDD4P46934 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4□□□□□ -1.77
NEDD4P46934 AC116563.2-201ENST00000624751 535 ntBASIC4□□□□□ -1.77
NEDD4P46934 BMS1P21-201ENST00000634565 365 ntBASIC4□□□□□ -1.77
NEDD4P46934 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4□□□□□ -1.77
NEDD4P46934 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4□□□□□ -1.77
NEDD4P46934 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
NEDD4P46934 AC046144.1-201ENST00000478559 1853 ntBASIC4□□□□□ -1.77
NEDD4P46934 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD4P46934 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.99□□□□□ -1.77
NEDD4P46934 RNU5E-10P-201ENST00000363506 118 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 MIR92A2-201ENST00000385299 75 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 RPL7P27-201ENST00000403775 720 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 AL512430.2-201ENST00000406786 339 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 RNU6-603P-201ENST00000411403 107 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD4P46934 AC009965.2-201ENST00000425328 970 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD4P46934 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.99□□□□□ -1.77
NEDD4P46934 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.99□□□□□ -1.77
NEDD4P46934 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 TVP23BP2-201ENST00000455082 615 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 RPL37P3-201ENST00000456825 293 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 AC010401.1-201ENST00000463867 348 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 PRELID3BP6-201ENST00000503839 571 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 AC112198.1-201ENST00000505369 1220 ntBASIC3.99□□□□□ -1.77
NEDD4P46934 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD4P46934 FCF1P8-201ENST00000510322 597 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms