Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL591416.1-201ENST00000404015 867 ntBASIC5.45□□□□□ -1.54
CCNFP41002 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNFP41002 RN7SKP235-201ENST00000410662 305 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNFP41002 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNFP41002 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.45□□□□□ -1.54
CCNFP41002 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNFP41002 GPR143P-201ENST00000434155 205 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AL049734.2-201ENST00000441066 616 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC114495.1-201ENST00000441274 436 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNFP41002 snoU13.8-201ENST00000458890 104 ntBASIC5.45□□□□□ -1.54
CCNFP41002 PPIAP19-201ENST00000486414 492 ntBASIC5.45□□□□□ -1.54
CCNFP41002 COX6B1P2-201ENST00000489624 230 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC108693.1-201ENST00000496068 432 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNFP41002 AC111000.3-201ENST00000508057 576 ntBASIC5.45□□□□□ -1.54
CCNFP41002 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
CCNFP41002 AC110792.2-201ENST00000510278 224 ntBASIC5.45□□□□□ -1.54
CCNFP41002 MTND6P2-201ENST00000512226 524 ntBASIC5.45□□□□□ -1.54
CCNFP41002 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNFP41002 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNFP41002 OR4R1P-201ENST00000529879 463 ntBASIC5.45□□□□□ -1.54
CCNFP41002 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNFP41002 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNFP41002 AC124068.1-201ENST00000563131 678 ntBASIC5.45□□□□□ -1.54
CCNFP41002 MIR4716-201ENST00000579628 84 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNFP41002 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNFP41002 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.45□□□□□ -1.54
CCNFP41002 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.45□□□□□ -1.54
CCNFP41002 AC018638.8-201ENST00000588755 281 ntBASIC5.45□□□□□ -1.54
CCNFP41002 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CCNFP41002 AC013553.2-201ENST00000604244 589 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.45□□□□□ -1.54
CCNFP41002 AC244107.2-201ENST00000611773 76 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC135507.2-201ENST00000612443 309 ntBASIC5.45□□□□□ -1.54
CCNFP41002 DISC2.1-201ENST00000612827 205 ntBASIC5.45□□□□□ -1.54
CCNFP41002 MIR6862-1-201ENST00000613016 70 ntBASIC5.45□□□□□ -1.54
CCNFP41002 MIR6862-2-201ENST00000614755 70 ntBASIC5.45□□□□□ -1.54
CCNFP41002 FRG1KP-201ENST00000623592 341 ntBASIC5.45□□□□□ -1.54
CCNFP41002 CU639417.4-201ENST00000623928 207 ntBASIC5.45□□□□□ -1.54
CCNFP41002 AC079597.1-201ENST00000624306 508 ntBASIC5.45□□□□□ -1.54
CCNFP41002 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNFP41002 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNFP41002 AL360270.2-201ENST00000562952 5985 ntBASIC5.45□□□□□ -1.54
CCNFP41002 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
CCNFP41002 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNFP41002 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNFP41002 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNFP41002 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNFP41002 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CCNFP41002 AC097714.1-201ENST00000511272 1647 ntBASIC5.45□□□□□ -1.54
CCNFP41002 SMG1P6-201ENST00000532337 2930 ntBASIC5.44□□□□□ -1.54
CCNFP41002 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCNFP41002 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCNFP41002 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.44□□□□□ -1.54
CCNFP41002 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCNFP41002 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCNFP41002 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 RNU6-97P-201ENST00000363387 104 ntBASIC5.44□□□□□ -1.54
CCNFP41002 RNU4-1-201ENST00000363925 141 ntBASIC5.44□□□□□ -1.54
CCNFP41002 RNU6-169P-201ENST00000365336 107 ntBASIC5.44□□□□□ -1.54
CCNFP41002 Y_RNA.548-201ENST00000384656 105 ntBASIC5.44□□□□□ -1.54
CCNFP41002 RNU6-1158P-201ENST00000391167 107 ntBASIC5.44□□□□□ -1.54
CCNFP41002 DBIP1-201ENST00000401435 260 ntBASIC5.44□□□□□ -1.54
CCNFP41002 RNU2-21P-201ENST00000410368 188 ntBASIC5.44□□□□□ -1.54
CCNFP41002 RNA5SP178-201ENST00000410380 128 ntBASIC5.44□□□□□ -1.54
CCNFP41002 EEF1A1P40-201ENST00000412883 573 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.44□□□□□ -1.54
CCNFP41002 AL807761.1-201ENST00000417622 171 ntBASIC5.44□□□□□ -1.54
CCNFP41002 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.44□□□□□ -1.54
CCNFP41002 RGS17P1-201ENST00000423358 553 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL133173.1-201ENST00000423458 397 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNFP41002 RPL12P46-201ENST00000436610 195 ntBASIC5.44□□□□□ -1.54
CCNFP41002 SUMO2P3-201ENST00000438311 288 ntBASIC5.44□□□□□ -1.54
CCNFP41002 RPS15AP9-201ENST00000439856 381 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AC016691.1-201ENST00000441321 413 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL161636.2-201ENST00000445179 927 ntBASIC5.44□□□□□ -1.54
CCNFP41002 EEF1B2P6-201ENST00000445713 673 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AC007677.1-201ENST00000445757 515 ntBASIC5.44□□□□□ -1.54
CCNFP41002 RPL36AP39-201ENST00000445859 318 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AC104651.2-201ENST00000447549 528 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL450023.1-201ENST00000450868 751 ntBASIC5.44□□□□□ -1.54
CCNFP41002 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCNFP41002 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNFP41002 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNFP41002 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 Y_RNA.701-201ENST00000516812 110 ntBASIC5.44□□□□□ -1.54
CCNFP41002 RNU6-835P-201ENST00000516974 104 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AC022690.1-201ENST00000526681 550 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.44□□□□□ -1.54
CCNFP41002 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNFP41002 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNFP41002 AC127381.1-201ENST00000555979 939 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL157700.1-201ENST00000561973 1432 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms